Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01036 ATGTCACAAGTGGAAGAACATCTTTCTCATGAGATTTTGGTGCCTGGAAATAGTGGAGACAGATTTCATGTTGGTATGCAGGTCCTGGCAATTGATTCTAGTCCTGTTTCTCTTGCCTACCTCGTACACTTGCTTAAACAGTGTGAATACGAAGTCACGTCAACAACAAAAGCAGACGAAGCCTTAGCTTTGTTAAGAGACAAGAAGAATAAATTTGATATAGTGATTGCTGATGTTGTGAGTAATGACGTCCCTGGATTTAAGCTACTGGAAATCATATCCCTTGAGATGGACATTCCCGTTATCTTGTTGTCTCTGGAAGAGGATTATGAGTCTGTAATGAAGGGAATTAGGCATGGGGCTCGAGACTGCATATCAAAACCTCCTCGAATTGAAGATATAAAGAAAATTTGGCTCCATGTTTACAGGAAGAAACTTGAGCATCAAGGTAATCAGCAAAAGGATTGCAATGACAGTACCAAAGAACAATCCATGGAACAAAAAGAACTTGGCCTAAAAAGGCAAAGAGAAAGTGGAAAAGATGTAAGAAATGACACAGACATTGATGAGAATCCCTCTTGCCCTAAAAGAGAAAGACTATGTTGGGCACCAGAACTTCACCAGAAGTTTGTTGATGCTGTTGTGCAACTTGGAATTGAGAATGCAGTTCCTAGTAAGATACTAAATTTGATGAATATTCCAGGATTGACTAGAGAAAAAGTTGGCAGCCATCTTCAGAAATTTAGACAAACTCTAAAGAAAGGAGCTGCAAAACGTAAAGGAACCCGTTCATGTAACACTTCAATGGATACTGGACCAAATAATCTGCAGACAGGTTGGCAACGTTACCCACGTTGTTCCTCGGATGTTATAAACCAAATGCCTTATCATGTACAGAATCAAAGACAGGAAAATTCTCCATCTATACCACAATTTCAACATTTATTCAGTCAAAATCCAAATCTTGGAGGATTGCAACAACAACAACATGTGCCTCCAGTGGTTTTTCCTCACACTGTTTTCAGTAACAATAGTGGTGGAAGTATCTTACCATTATATTCGGCTTCTTCTTATACTTCTCCTGTCTCGAGTTTTTCTTCTCTTTTAGCTGAAAGCTCTTCAAGTCCGATGGCCAACCTTCCTCAAGAACCTTTTGTCACCACGACTCTGGATATTGGATTACCGTCAGGTCCGACAGAAGGAACAAATTCTGCAAATTCTGTAAATGGTGGAAGTGAAGATCCAAACAGGAGCCATAGGGTACTTGATCCCGGCAACGTGTATGATCCAAGAGTAGCTTTACGAAGAGGAAATGGCAACACCAATTTGGGAAATCATTTAAGGGTTGCCAGCACGGGAGAAGATGAGATTATTACTCTGGTCAAACAGTTCCATGATGACAAACCTCCTCCTTCGATATGA 1422 0.4037 MSQVEEHLSHEILVPGNSGDRFHVGMQVLAIDSSPVSLAYLVHLLKQCEYEVTSTTKADEALALLRDKKNKFDIVIADVVSNDVPGFKLLEIISLEMDIPVILLSLEEDYESVMKGIRHGARDCISKPPRIEDIKKIWLHVYRKKLEHQGNQQKDCNDSTKEQSMEQKELGLKRQRESGKDVRNDTDIDENPSCPKRERLCWAPELHQKFVDAVVQLGIENAVPSKILNLMNIPGLTREKVGSHLQKFRQTLKKGAAKRKGTRSCNTSMDTGPNNLQTGWQRYPRCSSDVINQMPYHVQNQRQENSPSIPQFQHLFSQNPNLGGLQQQQHVPPVVFPHTVFSNNSGGSILPLYSASSYTSPVSSFSSLLAESSSSPMANLPQEPFVTTTLDIGLPSGPTEGTNSANSVNGGSEDPNRSHRVLDPGNVYDPRVALRRGNGNTNLGNHLRVASTGEDEIITLVKQFHDDKPPPSI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01036 473 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 303 IPR045279 GO:0009736
Pte11g01036 473 MobiDBLite consensus disorder prediction 261 279 - -
Pte11g01036 473 CDD REC_typeB_ARR-like 28 142 - -
Pte11g01036 473 SMART REC_2 26 138 IPR001789 GO:0000160
Pte11g01036 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 253 IPR017930 -
Pte11g01036 473 ProSiteProfiles Response regulatory domain profile. 27 142 IPR001789 GO:0000160
Pte11g01036 473 MobiDBLite consensus disorder prediction 394 414 - -
Pte11g01036 473 FunFam Two-component response regulator 193 255 - -
Pte11g01036 473 SUPERFAMILY CheY-like 25 153 IPR011006 -
Pte11g01036 473 MobiDBLite consensus disorder prediction 149 193 - -
Pte11g01036 473 NCBIfam myb-like DNA-binding domain, SHAQKYF class 198 250 IPR006447 GO:0003677
Pte11g01036 473 MobiDBLite consensus disorder prediction 254 279 - -
Pte11g01036 473 SUPERFAMILY Homeodomain-like 194 254 IPR009057 -
Pte11g01036 473 Gene3D - 194 254 - -
Pte11g01036 473 Gene3D - 26 164 - -
Pte11g01036 473 MobiDBLite consensus disorder prediction 394 425 - -
Pte11g01036 473 Pfam Response regulator receiver domain 28 136 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01036 Pte-Chr11 26161843 26165417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01036 20 254 Response Regulator Gene Family AT2G25180 46.281 5.34e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte11g01036 Response_reg 1.7e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01036 - K14491 qsa:O6P43_009872 251.136