Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01034 ATGAATATCTTTGAGAGAAAGAAGGCCATAAAGCTGTCAGCAGACATAGCCATGGCTTCATCAAAAAATCAAACTACTCGTTGGAGTCGTGCTATCATAGCCAACGCATCGAAAGAAAACAACGAAAAAAGCCTAATGAAGAAAATGCTTGGATCATCCAGTTCACTACCTTCAGAGATCGACGGAGCATTGCTGCACAATCACTCTACTTGGCCCCTTGTTTCACACAAGATTGGCAGAAGCAGAAAGATCCTGAAGAGAAGCAGATGTGGTAGCAGAATAAACAGGAGTAGCAGTAAGAAGATCATGGCCAAATCTATAGAGAAGAGGGTTGTCCAAAAACGAACAAAGGTACTTCAGAGTCTTGTTCCAGGAGGAGAGTTCATGGATGAGGTTTCTCTCATAGAAGAAACCCTAGATTACATATCATCCTTGACAGCTCAAGTTGATGTTATGAGATGTCTTGCTAATACCTCTGAGCTCCTGAATCATAAAGAGTAA 501 0.4152 MNIFERKKAIKLSADIAMASSKNQTTRWSRAIIANASKENNEKSLMKKMLGSSSSLPSEIDGALLHNHSTWPLVSHKIGRSRKILKRSRCGSRINRSSSKKIMAKSIEKRVVQKRTKVLQSLVPGGEFMDEVSLIEETLDYISSLTAQVDVMRCLANTSELLNHKE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01034 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 156 IPR036638 GO:0046983
Pte11g01034 166 CDD bHLH_AtIBH1_like 108 156 IPR044549 GO:0006355
Pte11g01034 166 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 157 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01034 Pte-Chr11 26081310 26082269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01034 2 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 42.593 1.25e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01034 - - vvi:100258663 159.073