Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01012 ATGGGTAAGGTTCACGGATCGCTGGCTCGTGCTGGTAAGGTAAGAGGCCAAACACCTAAGGTGGCCAAGCAAGACAAGAAGAAAAAGCCGCGCGGCCGCGCACACAAGAGGATGCAGTACAACCGCAGATTCGTCACTGCTGGTAATGATTCAAATTATTGCGCTCTGTCTTTTATATTTATTGGAAAATGGAAATTGTTCCATGTTTACCTGAAAATGTCACTGGAGCTTATATTATTGTGA 243 0.4486 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAGNDSNYCALSFIFIGKWKLFHVYLKMSLELILL* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01012 80 Pfam Ribosomal protein S30 3 47 IPR006846 GO:0003735|GO:0005840|GO:0006412
Pte11g01012 80 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 47 - -
Pte11g01012 80 MobiDBLite consensus disorder prediction 22 40 - -
Pte11g01012 80 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01012 Pte-Chr11 25195503 25196455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01012 1 47 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 95.745 2.44e-19 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01012 K02983 - vvi:100241142 95.1301