Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00992 ATGATTCCAACTGGAGAAAGACATTTTGTGATGTCTAAACACCAAAAGGAGACATTGCCAGTAACCAGCTTCCACATTTTTACAGAACTCATCACTCCTCCTGTTCAAGTAAAATACACCCAGCATCTTATCAACGGTCAGTTTGTAGATGCCGCATCAGGAGATGAAGAGGATATCAACCGCGCAGTGGCTGCAGCACGCAAGGACTTTGATGACGGGCCATGGCCAAAGATGTCTCCTTATGAAAGATCAAAGATATTTTTGCGTGTTGCGGACTTAATCGAGAGTCACAGCGAGGAGCTCGCGGCTCTGGAGACTTGGGATAATGGGAAGCCATATGAGCAGGCTGACAAAGCTGAACTGCCTATGCTTGTGCGTTTGTTTAGATACTACGCTGGTTGGGCAGATAAAATTCATGGTCTAACGGTTCCGGCTGATGGAAATTATCATGTGCAAATATTGCATGAACCTATTGGAGTCGCAGGCCAAATTATCCCATGGAACTTTCCTCTCCTCATGTTTGTTTGGAAAGTTGGGCCTGCATTAGCTTGTGGTAACACCATAGTTCTCAAGACCGCAGAGCAAACTCCTCTAACTGCCCTCTATGTGGGGCAGTTATTTCAAGAGGCTGGTCTTCCTCCAGGTGTCCTAAACATAGTTTCTGGGTATGGTCCTACTGCGGGTGCTGCTCTTGCCAGTCATATGGATGTAGACAAGCTTGCTTTCACTGGATCAACTAATACAGGAAAGATTGTACTTGAATTGGCGGCAAAAAGCAATCTTAAGCCTGTAACCTTAGAGCTCGGAGGAAAATCTCCTTTCATAATATGCGAGGATGCTGATGTTGACAAGGCTGTAGAACTTGCTCACTTTGCTTTGTTCTTCAATCAGGGGCAATGCTGTTGTGCTGGTTCTCGCACCTTTGTGCATGAACGGGTATATGACGAGTTCTTGGAGAAGGCAAAGGCACGTGCTTTGAGACGCAATGTTGGTGATCCCTTCAAAAAGGGTGTCGAGCAGGGTCCTCAAATTGACAAGGAACAATTTCAGAAGATATTGAAGTACATAAAGTCCGGTGTTGACAGCACCGCAAAGCTTGAATGTGGGGGTGGAAGGTTCGGTACCAAAGGTTACTTCATTCAGCCAACAGTCTTCTCAAACGTCTCGGATGATATGCTGATAGCACAAGACGAAATATTTGGCCCAGTACAGTCGGTCTTGAAATTCAAGGACATGGATGAAGTGATAAGAAGGGCAAACGCGACACGCTATGGCCTAGCTGCTGGTGTGTTCACAAAAAATGTGGACACAGCCAACACGTTGATGAGGGCACTACGGGCAGGCACTGTGTGGGTGAATTGCTTCAATGTTTTTGATGCTGCGATCCCCTTTGGTGGCTACAAGATGAGTGGAATAGGCAGGGAGAAGGGAATCTACAGCCTCAACAATTATTTACAAGTGAAAGCAGTTATCACCCCTTTGAACAATGCTGCATGGTTATAA 1503 0.4591 MIPTGERHFVMSKHQKETLPVTSFHIFTELITPPVQVKYTQHLINGQFVDAASGDEEDINRAVAAARKDFDDGPWPKMSPYERSKIFLRVADLIESHSEELAALETWDNGKPYEQADKAELPMLVRLFRYYAGWADKIHGLTVPADGNYHVQILHEPIGVAGQIIPWNFPLLMFVWKVGPALACGNTIVLKTAEQTPLTALYVGQLFQEAGLPPGVLNIVSGYGPTAGAALASHMDVDKLAFTGSTNTGKIVLELAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKAKARALRRNVGDPFKKGVEQGPQIDKEQFQKILKYIKSGVDSTAKLECGGGRFGTKGYFIQPTVFSNVSDDMLIAQDEIFGPVQSVLKFKDMDEVIRRANATRYGLAAGVFTKNVDTANTLMRALRAGTVWVNCFNVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVITPLNNAAWL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00992 500 CDD ALDH_F2BC 37 492 - -
Pte11g00992 500 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 266 273 IPR029510 GO:0016491
Pte11g00992 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Pte11g00992 500 Pfam Aldehyde dehydrogenase family 48 490 IPR015590 GO:0016491
Pte11g00992 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 50 490 IPR016162 GO:0016491
Pte11g00992 500 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 35 490 - -
Pte11g00992 500 FunFam Aldehyde dehydrogenase, putative 462 488 - -
Pte11g00992 500 FunFam Mitochondrial aldehyde dehydrogenase 2 272 461 - -
Pte11g00992 500 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 40 284 - -
Pte11g00992 500 SUPERFAMILY ALDH-like 30 494 IPR016161 GO:0016491
Pte11g00992 500 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 294 305 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00992 Pte-Chr11 23757583 23761157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00992 22 501 Aldehyde Dehydrogenase Gene Family AT3G48000 77.600 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00992 K00128 - zju:107405734 853.588