Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00956 ATGATGGATCCAAGTGATAAAGGATCAGAATCAGAAGACGTTACTAGTGGAAACGCAACTGGTACATACTCAGAAGAAAGCCATATGAGTGAGCAGAAGAAGACATGTGCTGATTGTGGTACCACTAAGACACCCCTTTGGAGAGGCGGTCCAGCTGGGCCTAAGTCACTATGCAACGCATGTGGGATCCGAAGCAGAAAGAAAAGAAGAGCAGTTCTTGGTTTAAACAAAGGGAGCTCAGATGATCACAATCACAGTAACATGAAAAGGAAGAAAGGCAGTAGTAGTGGTAGCAATAATAAGTTTGGTGATAGCCTGAAGCAGAGATTGCTGGCTTTAGGTAGAGAGGTTTTGATGCAGAGATCTACAGTTGAGAGACAGAGAAAGAAGTTGAAGGAAGAAGAACAAGCAGCAGTCTTGTTGATGGCTCTATCATATGGATCAGTTTATGCTTAG 456 0.432 MMDPSDKGSESEDVTSGNATGTYSEESHMSEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAVLGLNKGSSDDHNHSNMKRKKGSSSGSNNKFGDSLKQRLLALGREVLMQRSTVERQRKKLKEEEQAAVLLMALSYGSVYA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00956 151 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 32 70 - -
Pte11g00956 151 ProSitePatterns GATA-type zinc finger domain. 36 61 IPR000679 GO:0006355|GO:0043565
Pte11g00956 151 MobiDBLite consensus disorder prediction 73 105 - -
Pte11g00956 151 Gene3D - 30 101 IPR013088 GO:0006355|GO:0008270
Pte11g00956 151 ProSiteProfiles GATA-type zinc finger domain profile. 30 66 IPR000679 GO:0006355|GO:0043565
Pte11g00956 151 PANTHER OS01G0976800 PROTEIN 2 151 - -
Pte11g00956 151 SMART GATA_3 30 93 IPR000679 GO:0006355|GO:0043565
Pte11g00956 151 MobiDBLite consensus disorder prediction 1 59 - -
Pte11g00956 151 MobiDBLite consensus disorder prediction 91 105 - -
Pte11g00956 151 MobiDBLite consensus disorder prediction 11 26 - -
Pte11g00956 151 CDD ZnF_GATA 35 70 IPR000679 GO:0006355|GO:0043565
Pte11g00956 151 Pfam GATA zinc finger 36 70 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00956 Pte-Chr11 19889308 19891223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00956 1 152 C2C2-Gata Transcription Factor Family AT3G06740 59.259 1.15e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte11g00956 GATA 4.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00956 - - zju:107433211 223.016