Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00954 ATGGGGATTGACAAAGAAGGTTCAAAAGATGGAGGACGAAAAGTTGGTGGTTTCCTTCAGCTGTTTGATTGGACTGCAAAATCCAGGAAGAAGCTATTTGCAACCAAGTCAGACTCTCCAGAGAGTTCGAAACAGGGCAAAAGATATGATGGCAACTTGCCGACGACACATCTTCATTTGGTAGATGAAGATGAAAGTGGTACAGCATCAACTTTTAAAGGAAGTAGTGATCACAGTTGTGCATCCTCAATTGCAGATGATGAAGGATATGGAGGACGTGCCCCTGGGGTAGTAGCTAGACTTATGGGTTTAGATTCATTACCCACTTCAAGCTTCTCTGAGCCTTACTCTGCCCCATATTTTGACACACAATCCGTTTTGGATGCTCAATTTCGAAGGAAAAATGTTGATTACCTGCGAGATCATCAAATTTTGTATTCTGAAGATTTGCGATACAAGGTTGAAGGTACTACTAGAATTGAAGAGTTGAAAAGCCAGAAAATACTTACTAGGCCAATTGAGAAGTTCCAATCAGAAGCGTTACCTCCTAAATCAGCCAAAACAATACCAGTTACCCGCCATAAACTTTTGTCTCCCGTCAAGAGTCCTGGCTTCATTACAAGCAAGAATGCTGCATATATAATGGAAGCTGCCGCAAAAATTATTGAGCCTGGACCTCAAGTAACTACAAAGACCAAAATACCTGTTTCAACAGCTTCTCCCATGTCACTAAAGGTTCGAGAGCTAAAAGAAAAAATGGAGGCTTCACATAAAGGACGTGCTATTGGGTCCACATCATTAAATTCCAGAATGAGAGCTATGAAAGAGAAAGTAGAAGCTTCTAACAAAACAGCCAGGCCTATAGAAATGCGTCAAAGGACGACTGAGTCAAATACAGTCAATTATCTCAAGTCCTTAAACAAGAGCTGGAATGGCCCTGACGACACAACCTTCAGGGTACCTGTTGATTTAGAAGAAGGCCATGGTTTTAAGAACAAGGGAAAGTCTATTTCACTTGCAGTACAGGCAAAAGTAAATGTTCAAAGGAGGGAAGGTTTAAATTCAAGTTGCAACAGAAGTTTGGGAGGCCAGAAAGAACAGCTAGAGGATAAACCTAAAACAATGATAAAGAATCAACCCCATGTTCAAAAGAGTATGCAAAGGAAATCTTCTGGTCATAATTCACGTGGTGTGCTCAGGCAGAACAATCAGAAACAAAACTCTCTGATGGATAAAGACAAACTTCCTTCAAAAACATCAATTTCCAATGCACAAGGCAGGAAAGTCCTGCATGGGGATTCCCCTTATGGACGTCAAAAAAATTCAACTAAACCAGCAACAAATATGAAAGGTGGTTCCTGGAAGCAGGCCCTAGAGATCACTGATAGTGAAAAGGAAGTTCTATATTCGGGTGCAAATCATTTTCCTAGAAAGAAAAGATCAATAGGCAGGGACTTCCAAGGCAGAGACCAGTGTGTTGATAAAATGTTCGAAGAGAAAGCTCAAAAGCCAGGGCCATCTAACGGAACACTAACCAACAATAGTGTGAACTGGTTGAAGGACAGCAAAAAGAACGGAAGTGATGTTGTTTCTTTCACATTTACTACTCCACTTATGCGAACAAATCCAGCATCTGAAATTTCTGGTCAAAATGTTCTTTCTTTGGATGATAGAGTGAAAAGAGTTTTGGTTGAATCAGAGAGTGCAAAGTCATCTCCTGTGAGATACAATATCATCAAAGGGGATGCCTTGAGTATTCTTTTGGAACAAAAGCTGAGAGAACTAACGAATGGGTTTCAACCTTCACATGATGACCCCTTCAGAGAAGGAGCAACTTCTAGTACTGCCTCAAACTTAGAAGATCGAATGCCTTCTCATTTAGATAATATTCTTTCTAGATCGCGACACAATAAATATGAGAATCTCTCAACTGCGGATTTTTCTTTGACGAAATCTGCTTCTGAGTTTTCTTCTGTTGGCCATCAGGACTATAGAATGGCTCTCACACCTCAGACTGTTGATTGGATAAACCTTCAGAAAACGAATCATATTGAAGGCCAGTATCCAAATTGCAGATATCCGAGTCCAATTTCTGTCCTTGAACCTTCATTTTCAACTGAAAGTTGTTGCTCTTCAGTTAGTACAGAGACTGATTTTACAGCAGGAAGCAAGCTGTGTTCATCATCTATTCAAGCTCAGGAAATTGTTGGTTCAGCTTTTTCAAAGAAGCCCAATTCTGTTGATACAGACACAGAGTTGTTGGATTCAGCTTCTTCAATGTCAGTACAATCTGGTGTGGACAGCCAAGTATCTTCAAAATCATGGGCGCTAGAATTTGTGAAAGATGTCCTTTCTAATGTGGAGGTCATGTTTACTGACTTTATGTTTGGAAAAACACAGCGGATTGTAAGTCCCCTTGTTTTCACTCTACTGGAGAATTGTAAAAGTGGGTTGCAAGCTGACGATGGTGAGTATAGGCTGAGACGGAAACTCATGTTCGATTGTGTTTGCGAGTGCTTGGACTTGAGATTAAGCCTCTATGCTGGAGGGGGATGCAAAATGTGGACTAAAGGGGTTGCAACAGTGACAAGAAAGGAGTTGCTTGCTGAGCAAGTTTACAAGGATATTTCAGGTTGGAGAGCCATGGGGAACTCGATGGTGGATGAACTTGTAGACAATGACATGAGCACCCATCACGGTAAATGGCAGGATTTTGATGTTGATGCTTTTGAACTTGGCATAGATATTGGTTATCAAATCTTCAATTCTTTGATAGATGAAATTCTTGCTGATATCCTGCGAATTTAG 2808 0.4071 MGIDKEGSKDGGRKVGGFLQLFDWTAKSRKKLFATKSDSPESSKQGKRYDGNLPTTHLHLVDEDESGTASTFKGSSDHSCASSIADDEGYGGRAPGVVARLMGLDSLPTSSFSEPYSAPYFDTQSVLDAQFRRKNVDYLRDHQILYSEDLRYKVEGTTRIEELKSQKILTRPIEKFQSEALPPKSAKTIPVTRHKLLSPVKSPGFITSKNAAYIMEAAAKIIEPGPQVTTKTKIPVSTASPMSLKVRELKEKMEASHKGRAIGSTSLNSRMRAMKEKVEASNKTARPIEMRQRTTESNTVNYLKSLNKSWNGPDDTTFRVPVDLEEGHGFKNKGKSISLAVQAKVNVQRREGLNSSCNRSLGGQKEQLEDKPKTMIKNQPHVQKSMQRKSSGHNSRGVLRQNNQKQNSLMDKDKLPSKTSISNAQGRKVLHGDSPYGRQKNSTKPATNMKGGSWKQALEITDSEKEVLYSGANHFPRKKRSIGRDFQGRDQCVDKMFEEKAQKPGPSNGTLTNNSVNWLKDSKKNGSDVVSFTFTTPLMRTNPASEISGQNVLSLDDRVKRVLVESESAKSSPVRYNIIKGDALSILLEQKLRELTNGFQPSHDDPFREGATSSTASNLEDRMPSHLDNILSRSRHNKYENLSTADFSLTKSASEFSSVGHQDYRMALTPQTVDWINLQKTNHIEGQYPNCRYPSPISVLEPSFSTESCCSSVSTETDFTAGSKLCSSSIQAQEIVGSAFSKKPNSVDTDTELLDSASSMSVQSGVDSQVSSKSWALEFVKDVLSNVEVMFTDFMFGKTQRIVSPLVFTLLENCKSGLQADDGEYRLRRKLMFDCVCECLDLRLSLYAGGGCKMWTKGVATVTRKELLAEQVYKDISGWRAMGNSMVDELVDNDMSTHHGKWQDFDVDAFELGIDIGYQIFNSLIDEILADILRI* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00954 935 MobiDBLite consensus disorder prediction 378 427 - -
Pte11g00954 935 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 931 - -
Pte11g00954 935 MobiDBLite consensus disorder prediction 33 54 - -
Pte11g00954 935 Pfam DUF761-associated sequence motif 82 113 IPR032795 -
Pte11g00954 935 MobiDBLite consensus disorder prediction 350 454 - -
Pte11g00954 935 MobiDBLite consensus disorder prediction 598 621 - -
Pte11g00954 935 Pfam Domain of unknown function (DUF4378) 777 927 IPR025486 -
Pte11g00954 935 MobiDBLite consensus disorder prediction 607 621 - -
Pte11g00954 935 MobiDBLite consensus disorder prediction 436 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00954 Pte-Chr11 19779587 19784640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00954 13 933 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.573 1.28e-89 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00954 - - qsa:O6P43_021819 982.63