Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00942 ATGTCGGCTACAATGGAACAGCCAGTTTGGTTACAGAAACTGTTGACCGCAACTTTCTACGAACCATGTCCAATCCATAAGCCAGACCAACCCAGGAAAAAGCAAAACCCTACAGACACTTCATTGTTTTGCTTGGACTGCGTTGTCTCAGCTTGTGCCTTATGTGTCGACAATGGCGGTAGTCACACAAATCACCGGAAGCTCCGAGTGTATAAAGCTTCACATAAAGTGAGCGTACGAAAAACGGAGTTGTCTTCATTAATGGATGTTTCCAAGATACAACCTTTTAGTGTGAACAGTAATTCTATATATTTTCTTAAGCCAAGAGGAGAAGAGAATGATCGACGTATTGAACGTAATAAACCAAATGCATGTGTTGCCTGTGGGTGGGCACTCAAATCGGAGACTTATTGTTCTCTATATTGCAAAGTAAGGAGTGGTGAGAGTTCATCTTCTGCAGAAAGTGGTTGGGAAGAAGGAGAAACTACTGGCAGATCATCATCAATCATGAGTCAGACGATGTTGAAGCCACATCAAGGTCAATCTTTCAGGAGGAGAAGTAGAAAAGGAGTGCCCAGAAGGGCTCCGTTCTTTTAG 597 0.4305 MSATMEQPVWLQKLLTATFYEPCPIHKPDQPRKKQNPTDTSLFCLDCVVSACALCVDNGGSHTNHRKLRVYKASHKVSVRKTELSSLMDVSKIQPFSVNSNSIYFLKPRGEENDRRIERNKPNACVACGWALKSETYCSLYCKVRSGESSSSAESGWEEGETTGRSSSIMSQTMLKPHQGQSFRRRSRKGVPRRAPFF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00942 198 MobiDBLite consensus disorder prediction 149 198 - -
Pte11g00942 198 Pfam PLATZ transcription factor 72 144 IPR006734 -
Pte11g00942 198 MobiDBLite consensus disorder prediction 149 180 - -
Pte11g00942 198 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00942 Pte-Chr11 18182009 18182806 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pte11g00942 PLATZ 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00942 - - dzi:111316463 102.064