Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00923 ATGATTGTGAAGGAAAATTTGGTTGATATTGCTCATCTGATGACTAAAGATAGTGGAGAAAATCAGAGAGGGTCCATATTCGAACCCTATATTGGGTTAGAGTTTGATACAGCTGACCAAGCTCGTGACTTATATGCATCATATGCTATGCGCATTGGTTTTAAAGCTCGGGTTGGTCAGCTATACCGGTCGAGAACTGATGGGTCAGTTTCTTCTCGAAGATATGTGTGCTCCAAAGAGGGTTTTCAACTTAATTCCAGGATAGGCTGTCCAGCATTCATTAGAGTTCAAAGACGCGATACTGGCAAGTGGGTTATTGATCATTTTGTAAAGGAACACAATCATGATCTTGAACTTGGTGGTGCAAACTGCTCTCCTGTTCCTGAGGTGATGGCCTCTAAGGCTAGGAAGGGGTTGGTTAATGTGTCATCTAGACCTAGGATAAAATTTCTTGGTGAACTCAAGGATGAACTCTCTAGTCCATCAGGTGCTATCAGTGTCAAGCGCCTTAAAAAGGATATAGAACAATGTGTCATTGAACCATATGTTGGTCTTGAGTTCAATTCAGCCGATGAAGCTTATCAATGTTATAGTGCATATGGAGCCAGTGCAGGATTTCGAGTTCGAATTGGTCAATTATTTCGATCAAGAAATGATGGGTCCATTACATCAAGACGTTTCGTTTGCTCAAAAGAGGGATTTCAGCATCCTTCACGATTAGGTTGCAGAGCTTATTTAAGGATTAAGAGACTGGACTGTGGCAAATGGGCTGTAGATCGTCTTGAAAAAAAACATAATCATGAGTTGGACTCAGCAATGGATTGCCAGACCTCACCTTTCTCTCCCTCAAAAGCTATGATAAAGGATGTGCAAGATGGTTTGATAAGTGATAATTTGTTTAGTTCAGGAAAGAGCTCAGGTAAAAGTAAAAGAGGTCGTGAAAATCGAATCAAAGCTGACTGGTACAATGCAATATTTGAGTATTTCCAGTCCAGGCAAGCAGAAGATACTGCTTTCTTTTATGCAGTACAAGTTCTTGATGGTAATTGCATGAGTATATTTTGGGCTGATGGCCGGTCTAGATATTCATGCAGTCGTTTTGGTGATACAGTGGTTCTGGATACTTCATACAGGCAAAGTAATTATGGGATTCCATTTGCTACATTTGTTGGAATTAATCACCATAAGCAACCTGTGCTGCTTGGATCGGCTTTGATTGCTGATGAGTCTGAAGAATCATTCACTTGGTTACTTCAAACATGGCTTAGGGCCATGTCTGGCCGCCAACCTCTGTCAATAATTGCCGACTATGATATGAGCATGCAGCACGCCATTGCTAGAGTCTTTCCAGGAACCCATCATCGATTTTCATTGTGGCAACTTAGGGCTCAGGAACAAGAGAATTTGAGTCTCATGGATGATGGATTTAAATATGAGTATGAGAAGTGCATTTACCAGAGTCAGTCAGCTGATGAGTTCGATGCATCATGGAATGCCTTTCTTAGCAGATACGGATTGAAGGAAAATACTTGGTTGAAGGAAATGTATGAGAAGCGTGCATGCTGGGTTCCGATTTATTTAAGGGGCTCTTTTTTTGCTGGGATTCCTGTATGTGAGAGTATTGATTCATTCTTTGGTTCTCTATTAAATGCTCAGACTCCATTCATGGAATTCATTGCACGATATGAAAGAAGCCTTGAGCGTCGCAGAGAGGAAGAAAGAAAGGAGGATTTTGATACTTCAAATCTGCAAGCCCTTCTGCAGACGGAAGACCCGATAGAAGACCAATGCAGACAATTGTATACACTCACCATCTTCAAAATGTTTCAGAAGGAACTTCTACAGAGCTATAGTTATCTTGGTTTTAAAATCTATGAAGAAGGTTGCCTCAGCAGGTATTTATTGCGTAGGTCAGGGAATGATAGTGACAAGCATGTAGTGACATTTAGTTCATTCAATGTCATCGTGAGTTGTAGCTGTCAAATGTTTGAATACGAGGGAATTCTTTGTAGACACGTTTTAAGAGTTTTTCAAATATTGGATGTAAGGGAAGTTCCATCTCGCTACATCTTACACCGATGGACAAAAAATGCTGAGTATGGTATTGTTCCTGATATTGAATCGTGGAGTAGCTCTCCTGAGATTAGGGCCTTGATGTTATGGAGTCTGAGAGAAACTGCAAGTAGATATATAGATGCTGGTGTAACATCTCTTGAAAAGTATAGACTTGCCTATGAGATTTTGAGGGAGGGAGGAAGAAAACTCTGTTGGCATAATTAA 2280 0.4061 MIVKENLVDIAHLMTKDSGENQRGSIFEPYIGLEFDTADQARDLYASYAMRIGFKARVGQLYRSRTDGSVSSRRYVCSKEGFQLNSRIGCPAFIRVQRRDTGKWVIDHFVKEHNHDLELGGANCSPVPEVMASKARKGLVNVSSRPRIKFLGELKDELSSPSGAISVKRLKKDIEQCVIEPYVGLEFNSADEAYQCYSAYGASAGFRVRIGQLFRSRNDGSITSRRFVCSKEGFQHPSRLGCRAYLRIKRLDCGKWAVDRLEKKHNHELDSAMDCQTSPFSPSKAMIKDVQDGLISDNLFSSGKSSGKSKRGRENRIKADWYNAIFEYFQSRQAEDTAFFYAVQVLDGNCMSIFWADGRSRYSCSRFGDTVVLDTSYRQSNYGIPFATFVGINHHKQPVLLGSALIADESEESFTWLLQTWLRAMSGRQPLSIIADYDMSMQHAIARVFPGTHHRFSLWQLRAQEQENLSLMDDGFKYEYEKCIYQSQSADEFDASWNAFLSRYGLKENTWLKEMYEKRACWVPIYLRGSFFAGIPVCESIDSFFGSLLNAQTPFMEFIARYERSLERRREEERKEDFDTSNLQALLQTEDPIEDQCRQLYTLTIFKMFQKELLQSYSYLGFKIYEEGCLSRYLLRRSGNDSDKHVVTFSSFNVIVSCSCQMFEYEGILCRHVLRVFQILDVREVPSRYILHRWTKNAEYGIVPDIESWSSSPEIRALMLWSLRETASRYIDAGVTSLEKYRLAYEILREGGRKLCWHN* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00923 759 ProSiteProfiles Zinc finger SWIM-type profile. 633 681 IPR007527 GO:0008270
Pte11g00923 759 Pfam FAR1 DNA-binding domain 197 269 IPR004330 -
Pte11g00923 759 Pfam FAR1 DNA-binding domain 44 117 IPR004330 -
Pte11g00923 759 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 124 IPR031052 GO:0006355
Pte11g00923 759 SMART 26again6 656 683 IPR006564 GO:0008270
Pte11g00923 759 Pfam MULE transposase domain 371 461 IPR018289 -
Pte11g00923 759 Pfam SWIM zinc finger 657 678 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00923 Pte-Chr11 15818645 15821572 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pte11g00923 MULE 7.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00923 - - qsa:O6P43_003464 1080.47