LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte11g00915	ATGGAGAGGTATAAGTTGATCGAGGAAGTTGGTGATGGTACGTTTGGAAGTGTATGGAGAGCCTTAAATAAGCAAACTGGTGAAGTTGTTGCAATCAAAAAGATGAAGAAGAAGTATTACTCCTGGGAGGAATGTGTAAATTTGAGAGAAGTCAAGTCACTGAGGAAGATGAGTCATCCCAATATCGTAAAACTAAAGGAAGTGATTAGAGAAAATGACATCCTGTACTTCGTTTTTGAGTATATGGCGTGCAACTTATACCAGCTCATGAAAGACAGAGTAAAGCCTTTTTCTGAACCTGAAATTAGGAATTGGTGTTTTCAAGTTTTTCAAGGTCTAGCTTACGTGCATCAGCGTGGGTACTTTCATCGTGACCTTAAGCCAGAGAACTTGTTAGTCACGAAGGAGATTATCAAAATCGCAGATTTTGGTCTTGCTCGAGAAATCAATTCACATCCACCGTATACTGAGTACGTTTCAACACGATGGTACCGTGCACCTGAAGTGCTACTACAGTCTTATATGTATACCTCCAAAGTGGATATGTGGGCAATGGGCGCTATCATGGCTGAGCTGTTTTCCCTTCGTCCTCTTTTTCCTGGAGTGAGTGAAGCAGATGAAATCTACAAAATATGCAGTGTGATTGGCAGTCCTACAAATGAATCATGGGCAGATGGACCTTCTCTTGCAAGGGATATCAACTACCAATTTCCACAGCTTGCTGGTTTACATCTATCTGTATTAATTCCCTCAGCGAGTAGCAATGCTATTAGCCTTATCACATCACTTTGTTCTTGGGATCCATCCAAGAGGCCTACTGCTGGTGAGGTCCTTCAGCATCCGTTTTTTCAGACTTGCTTTTATGTTCCTCCATCACTTCGTCCAAGAGTAGCAGTTAACAGAACTCCTCCATCTGGTGGAATGAAGGTCTCATTTGATCAAAATGCTGTTAAGAGATACCCTGATGCACTATCTAGTGACAAGCACGGCAACAACTTCCCTTCTTCAAAGTCACATTCTTCTCTTGGTGCAGGTGTGCAACGCAAGCTGGATATGATTAATAGGGATGTGAACAAGGGCGACAAGTTGACGAAGACCGCTCAGCAACAACAACCCAAATATCGACCACCTGTGAATAGCAGTATATTGAACAAGGGGAGGAAGGTGCGTGGAGTTTCAGAAACGGTTGATAAATTGGCAAACCTAGCTGTTGATTCTCCCAAGCCATCTATTTTGCCTATGAAGGCTGGGGTCCGCTGGACATCTGACTCTGGCAATTTGTTGCTCCGATCCCAAGAGATCCATTCAGGCAGAAGCTACAGTAGGAAGGTCGCAGGATGA	1341	0.434	MERYKLIEEVGDGTFGSVWRALNKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMACNLYQLMKDRVKPFSEPEIRNWCFQVFQGLAYVHQRGYFHRDLKPENLLVTKEIIKIADFGLAREINSHPPYTEYVSTRWYRAPEVLLQSYMYTSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICSVIGSPTNESWADGPSLARDINYQFPQLAGLHLSVLIPSASSNAISLITSLCSWDPSKRPTAGEVLQHPFFQTCFYVPPSLRPRVAVNRTPPSGGMKVSFDQNAVKRYPDALSSDKHGNNFPSSKSHSSLGAGVQRKLDMINRDVNKGDKLTKTAQQQQPKYRPPVNSSILNKGRKVRGVSETVDKLANLAVDSPKPSILPMKAGVRWTSDSGNLLLRSQEIHSGRSYSRKVAG*	447

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte11g00915	446	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	3	334	-	-
Pte11g00915	446	ProSitePatterns	Protein kinases ATP-binding region signature.	10	34	IPR017441	GO:0005524
Pte11g00915	446	SMART	serkin_6	4	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pte11g00915	446	FunFam	serine/threonine-protein kinase MAK isoform X1	84	293	-	-
Pte11g00915	446	MobiDBLite	consensus disorder prediction	361	382	-	-
Pte11g00915	446	SUPERFAMILY	Protein kinase-like (PK-like)	1	287	IPR011009	-
Pte11g00915	446	MobiDBLite	consensus disorder prediction	322	347	-	-
Pte11g00915	446	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	121	133	IPR008271	GO:0004672\|GO:0006468
Pte11g00915	446	MobiDBLite	consensus disorder prediction	363	378	-	-
Pte11g00915	446	Pfam	Protein kinase domain	4	283	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte11g00915	Pte-Chr11	14412776	14416342	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte11g00915	1	290	Core Cell Cycle Gene Families	AT3G48750	37.919	1.91e-67	215

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_RCK	Pte11g00915		Pkinase	9.2e-76	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte11g00915	K08829		-	qsu:112020153	680.633

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