Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00879 ATGGACACCCCAGAGAGGAACCAGAACGGGACACCCCTTTCTAAATTCGAGGATTCCCCTGTCTTCAGCTATATCAGCAGTCTTTCTCCAATCAAACCGTTCAAGTCTTTGCACGTCACTCAGACTTTCAATTCACTTAGCTTTTCGTCCCCTCCTTCTGTTTTTACATCACCGCATGTCACCTGTCACAGAGAGTCCAGATTCCTCAGAAGCCACAACACTACAGATCTATCAAATCCTAAAGAAGACAAAGGGTCCACAAATGATGATAGTGCAGATGAGACCAATGTGTATACTAACGGAAATAAAGAGCAGGAAAATACTGACCAAGGTGTTCTATTAGAAGATGGTTCTATTGAGTCATCTAAAGAAGATAAAGATTTCCCAACTGAGCTGCCAAACAAACTTAATTACAACTTTGGCAGCCCTGATTATGTGGCCGCACCTTGTTCAGGCATTGAGACTAGTTCACTGTTGGAATTGCCTAGCAACTCAGAATCCATGGCTGTGTCACTTCAACAAACTGAGAGAGATCTATCTGAGGATGAACTCCAAGTAGTGGAGATATCTGAAGTTTGTTGTATTAAGCCAAAACCAGAAGGCACTGAATCTGATTGGGACAGTTTGATTGCAGATGCTTCTGAGCTTTTAATTTTTAACTCTCCAAATGATACAGAAGCTTTCAAGGGTCTCATCCGCAGGCCCTTAGATCCTGCAGCACGATTTTCCAATGCTGTGTTACAGTTATCACAGGATGACATCAACAATGTCAAGAATCTCCATTTTACTGATCAGATTACTTCTTCACAGTGTGAACCTGACTACAATTCTTCTGATCCTGTAGCAGCAATTAAGCAGGTAGAAGGTCATCCTGGGCACCAAATAAGGGACTATGCCAATGTTGCTACCATGGATTTCAATCTGAACGAGCAAATGAATAATGAGTCTGGTTTTATCATGCAACGTGGTCTGCGAAGGCGCTGTCTAGATTTCGAGATGACAAGCACTCGGAAGATGTCAGCTGATGGTTCTAATAGCAACAATTGCATATGTCCATCTGAGAAGATTACAATCAACGATAAGCAGATAATCTCTTTAAAACAAAGTGCCGACTCACAAAGGTATATTGTGCCTGGAATTGGACTGCACTTAAATGCACTTGCAAAAACCTTGAAAGTTTATGGAGACATTAAGCACGAAAGTTCTCAAGGATCAAGTTCTACCGTACAACCACCTGTGAGTCAGGAGCATTCTCTTTCTATTTTAGTATCTTCCGAGAGATACGCAGATCCCTATGAGTGTGAAAATCAATTGGCTGAAAATGGTTCCCAGCAGTCTGAATATTTGGTCACTGAAGATTTAAATCAGAACAGCCCGAAAAAGAAAAGACGCAAGTTTGAAACTGGTGGAGAAAGTGAGGGCTGCAAACGGTGTAATTGCAAGAAATCGAAATGCTTAAAGCTGATGAATCAAACAATACGCCAGCCTCAGCAAGACACAAAAGGGGATGCAACTGCAAGAGATCCAATTGCCTAA 1536 0.418 MDTPERNQNGTPLSKFEDSPVFSYISSLSPIKPFKSLHVTQTFNSLSFSSPPSVFTSPHVTCHRESRFLRSHNTTDLSNPKEDKGSTNDDSADETNVYTNGNKEQENTDQGVLLEDGSIESSKEDKDFPTELPNKLNYNFGSPDYVAAPCSGIETSSLLELPSNSESMAVSLQQTERDLSEDELQVVEISEVCCIKPKPEGTESDWDSLIADASELLIFNSPNDTEAFKGLIRRPLDPAARFSNAVLQLSQDDINNVKNLHFTDQITSSQCEPDYNSSDPVAAIKQVEGHPGHQIRDYANVATMDFNLNEQMNNESGFIMQRGLRRRCLDFEMTSTRKMSADGSNSNNCICPSEKITINDKQIISLKQSADSQRYIVPGIGLHLNALAKTLKVYGDIKHESSQGSSSTVQPPVSQEHSLSILVSSERYADPYECENQLAENGSQQSEYLVTEDLNQNSPKKKRRKFETGGESEGCKRCNCKKSKCLKLMNQTIRQPQQDTKGDATARDPIA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00879 511 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 488 IPR044522 GO:0003700
Pte11g00879 511 MobiDBLite consensus disorder prediction 452 475 - -
Pte11g00879 511 MobiDBLite consensus disorder prediction 91 111 - -
Pte11g00879 511 MobiDBLite consensus disorder prediction 71 90 - -
Pte11g00879 511 MobiDBLite consensus disorder prediction 71 111 - -
Pte11g00879 511 MobiDBLite consensus disorder prediction 491 511 - -
Pte11g00879 511 MobiDBLite consensus disorder prediction 456 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00879 Pte-Chr11 11597659 11601109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00879 11 488 CPP Transcription Factor Family AT3G22780 35.211 1.69e-58 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00879 - - qsa:O6P43_003327 444.891