Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00875 ATGTATCTATTGTGGAAGCAGTTTCATCTCTGCTTTTACAAGCTCAAGGACTCAACATCAAACCTATTTCCCACTCACTCAAATCAACAAGAAAAACAAGTTGATCCAGCTTCTGCTGATTCTATCATCATGAATAAGATCAAGTTGTTCAACATCGATCAAGAGCATCATGCCTTCTATGATGACTTGACTACATCATCACCAGATTACTTCACTTCCAAATCCGCAGATGACCTTTTCTTCTCTTCAATGGCATCAGGAGAAGAGGACTTTGACTCTTGGGATTCACGTCTGCCGGACTTGACTTCTATCTATGCATCTCAGCGTTTCTTCTTCTCCTCTCCGGGCCGTTCTAATTCAATCATAGAGTCTCCTGACACTCGGCCAAGTACTACAGGTATATTTGCAGCTGCTAAAGCTGCGGGAGGCGTCAGAGTGCCTAAGTACTCGTTAAATCCATATGAAGATTTTAGGTGTTCAATGCAGGAAATGGTAGAAGCTAGAGATCAGTTATTGATGGATGATAAATTTGAATGGGATTATTTACATGAGCTTCTGCTTTGTTATCTTGCTTTGAATCCCTCACATACACACAAGTACATAATTCAAGCTTTCACAGACATTATCATCTCTCTGTTGTCTTCTTCAACTACTTCATCACCGGCTTCAAATTATGGCCAGGACCCCAAGAATATAGAGCAGCTAAATGGTATCACAAGGCGGTTGGTATTCAACTAA 738 0.4079 MYLLWKQFHLCFYKLKDSTSNLFPTHSNQQEKQVDPASADSIIMNKIKLFNIDQEHHAFYDDLTTSSPDYFTSKSADDLFFSSMASGEEDFDSWDSRLPDLTSIYASQRFFFSSPGRSNSIIESPDTRPSTTGIFAAAKAAGGVRVPKYSLNPYEDFRCSMQEMVEARDQLLMDDKFEWDYLHELLLCYLALNPSHTHKYIIQAFTDIIISLLSSSTTSSPASNYGQDPKNIEQLNGITRRLVFN* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00875 245 NCBIfam uncharacterized plant-specific domain TIGR01568 146 214 IPR006458 -
Pte11g00875 245 Pfam Transcriptional repressor, ovate 150 212 IPR006458 -
Pte11g00875 245 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 214 IPR038933 GO:0045892
Pte11g00875 245 ProSiteProfiles OVATE domain profile. 146 211 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00875 Pte-Chr11 11377555 11378292 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte11g00875 Ovate 5.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00875 - - qsa:O6P43_003359 171.785