Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00856 ATGGTATCCAAGGTGGCAATCCCACGCCCTCCGCCGCTTCCACCACCACTCACCCCACCGTGTATTCTCGGGAAGTATCAACTTGTTCGCTACTTAGGCCGTGGCAGTTTTGCGAAGGTCTATGAGGCTCGGTCTCTTGTTGACAACACTTCCGTGGCCATCAAAGTAATTGACAAGGCCAAAACTGTGGATGCCTCCATGGAACCTCGTATCATTCGAGAAATTGATGCGATGCACCGCCTACAACAACACCCACACATCCTTAGAATCTTCGAAGTTTTAGCATCGAAGACCAAAATCTACCTCGTCGTGGAATTGGCATCCGGTGGTGAGTTGTTATCTAAGATCACTCGGAAAGGAAGATTTTCGGAACCAATGTCACGACGTTACTTTCAACAGTTGGTCTCCGCTCTCAGATTCTGCCATGAAAATGGAGTTACACACCGGGACATCAAGCCCCAGAATCTTCTATTAGACGAAGATGGTAATCTTAAAGTTTCCGATTTCGGACTCTCTGCTTTGCCTGAACAAATCAACAATGGCTTGCTTCAAACTGCCTGTGGTACCCCGGCTTATACGGCTCCTGAGGTTTTCAGACACCGTGGTTATGAAGGTTCCAAAGCTGATGCTTGGTCTTGTGGCGTTATACTCTTTGTTTTGCTCGCAGGTTTTCTACCATTTGATGATAGCAACCTTGCGACTATGTACAAGAAAACCAATAGGCGAGAGTTTGTCTTCCCGGAGTGGATCTCTAAGCCGGCGAGGTATATAATTCACCACCTGCTCGATCCAAATCCAAAGACAAGGATGAGCGTAGAGACCCTCGTTCATACCGCATGGTTTAAGAAATCACTCAAGTTGAAACCACAGTGGAGTGTGCTTGAATCAGAGCTGAACGCTAAGCCGAATACTAAGCCTTTAATGTTGTCTTCAGGGTTGAATGCCTTTGATATAATTTCTATGTCCAGTGGATTGGATTTGAGGGGTTTGTTTGAGACAACAGCCACAATGAGTAACAGGAAAGAGAAGAGGTTTACATCTAAGGCATCAATGGAAGTTGTGATATCGAAGGTGATAGCTATCGGCGGTGAATTGGGTTTCATAGTTGAGAAAGGAAAAGATGAAACCATGGTGGGATTGGGGAAAGGGAAGGTGGTGGTGATAGTTGAAGCGTTGGAAATCGTGCCGGCGTTGTTGTTGGTGGCAGTGAAAATAGTGGAGGGAGGGGTAGAGTTCGATGAGTTTCATTGGGGTGATCTGAAAGCTGGATTGCAAGATATTGTCTTCTCATGGCACAAGGAAACAACTTAG 1311 0.4615 MVSKVAIPRPPPLPPPLTPPCILGKYQLVRYLGRGSFAKVYEARSLVDNTSVAIKVIDKAKTVDASMEPRIIREIDAMHRLQQHPHILRIFEVLASKTKIYLVVELASGGELLSKITRKGRFSEPMSRRYFQQLVSALRFCHENGVTHRDIKPQNLLLDEDGNLKVSDFGLSALPEQINNGLLQTACGTPAYTAPEVFRHRGYEGSKADAWSCGVILFVLLAGFLPFDDSNLATMYKKTNRREFVFPEWISKPARYIIHHLLDPNPKTRMSVETLVHTAWFKKSLKLKPQWSVLESELNAKPNTKPLMLSSGLNAFDIISMSSGLDLRGLFETTATMSNRKEKRFTSKASMEVVISKVIAIGGELGFIVEKGKDETMVGLGKGKVVVIVEALEIVPALLLVAVKIVEGGVEFDEFHWGDLKAGLQDIVFSWHKETT* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00856 436 FunFam Non-specific serine/threonine protein kinase 19 111 - -
Pte11g00856 436 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Pte11g00856 436 Pfam Protein kinase domain 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00856 436 SUPERFAMILY Protein kinase-like (PK-like) 22 310 IPR011009 -
Pte11g00856 436 Gene3D Transferase(Phosphotransferase) domain 1 109 287 - -
Pte11g00856 436 Pfam NAF domain 313 371 IPR004041 GO:0007165
Pte11g00856 436 Gene3D Kinase associated domain 1, KA1 310 430 - -
Pte11g00856 436 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00856 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Pte11g00856 436 FunFam Non-specific serine/threonine protein kinase 18 305 - -
Pte11g00856 436 Gene3D Phosphorylase Kinase; domain 1 22 108 - -
Pte11g00856 436 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00856 436 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Pte11g00856 436 CDD CIPK_C 314 425 - -
Pte11g00856 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 22 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00856 Pte-Chr11 10812909 10815324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00856 6 434 Miscellaneous Gene Families AT3G23000 57.208 1.13e-167 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte11g00856 Pkinase 2.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00856 K12761 - qsa:O6P43_021501 621.698