Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00851 ATGACGACCATGATGGGAAAGGAGCATGATCTGAACTTGAAGGAGACGGAGCTTCGTTTGGGATTGCCTGGTGGTGGTGGTAATGCGGTTCTTGAGCCAGAGACTCCCAAGACTACTTGTAAGAGAGCGTTCTCAGAGACTATTGATCTCAGGCTCAATCTTCAGTCCCCGCAGGAGGATGTCAATCAAAATTTGATGAATGCGAGAAAGGAGGAGAACCTCGTTTCTAGTGCTAAAGACTCAGCTAAGCCCCCTGCAAAGGCACAAATTGTGGGTTGGCCTCCAGTCCGATCGTACAGGAAGAACGTAATGACGACACAGAACAGTGATGAAGGTGACAAGGTTAGCAGCATCGCTGCATTTGTCAAAGTTTGCATGGATGGCGCACCGTACCTTCGCAAGGTGGACTTGAAAATGTACAAGAGTTACCAACAGCTTGCTGATGCCTTGGCCAAGATGTTCAGTAGCTATGGGCCCCAAGGAATGACAGACTTCATGAATGAAAGCAAGTTGATGGATCTTCTGAACAGTTCTGAGTATTTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTACTGGGCGATGTCCCATGGGAGATGTTCGTTCAATCATGCAAGCGCCTTCGAATAATGAAAGGGTCAGAAGCAATAGGACTTGCCCCAAGAGCAATGGAGAAATGCAAAAACAGAAGCTGA 699 0.4735 MTTMMGKEHDLNLKETELRLGLPGGGGNAVLEPETPKTTCKRAFSETIDLRLNLQSPQEDVNQNLMNARKEENLVSSAKDSAKPPAKAQIVGWPPVRSYRKNVMTTQNSDEGDKVSSIAAFVKVCMDGAPYLRKVDLKMYKSYQQLADALAKMFSSYGPQGMTDFMNESKLMDLLNSSEYLPTYEDKDGDWMLLGDVPWEMFVQSCKRLRIMKGSEAIGLAPRAMEKCKNRS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00851 232 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 219 IPR003311 GO:0005634|GO:0006355
Pte11g00851 232 Gene3D - 113 226 - -
Pte11g00851 232 FunFam Auxin-responsive protein 114 224 - -
Pte11g00851 232 Pfam AUX/IAA family 15 223 IPR033389 -
Pte11g00851 232 ProSiteProfiles PB1 domain profile. 119 214 IPR000270 GO:0005515
Pte11g00851 232 SUPERFAMILY CAD & PB1 domains 116 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00851 Pte-Chr11 10722392 10724390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00851 116 222 B3 DNA Binding Superfamily AT4G23980 31.776 1.14e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pte11g00851 AUX_IAA 7.8e-75 CL0072