Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00832 ATGCTTAACAAGCGCCACACTGAGCTTTCAATCAATGAAAGCAGTGGCAGAAGCAGCGGAAGAGATGAAGATGAAGACAGAGATGGAGGTGATGAGCCAAAAGAGGGTGCTGTTGAGGTTGGTGCCAGAAGACCAAGAGGCCGGCCAGCTGGATCTAAAAATAAACCTAAACCACCAATTTTTGTGACAAGGGACAGCCCAAATGCTCTGAGGAGTCATGTGATGGAGATAGCCAGTGGTGCTGATGTTGCAGAAAGCATTGCTCAGTTTGCAAGAAGGCGTCAACGTGGGGTTTGTGTCCTTAGTGGCAGCGGCTCGGTGGCCAACGTAACTCTCAGACAACCAGCAGCACCGGGAGCTGTGGTGGCACTTCACGGCAGGTTTGAGATTCTATCTCTGACCGGTGCATTCTTACCTGGACCCGCCCCACCGGGTTCGACGGGGTTGACGGTGTATCTTGCGGGGGGTCAGGGTCAGGTTGTTGGCGGAAGTGTTGTTGGACCTTTGGTAGCAACTGGGCCAGTTATGGTCATTGCTGCAACTTTTTCTAATGCAACGTATGAGAGGTTGCCTCTGGAAGATGATGATGAGGGAGGAAGTTCTGCTCAAGGTGCTGGTGGAAACTCTCCACCGGCCATAGGAGGCAGCGGGGGGCAGTTGCAGTCAGGGATTCCTGATCCATCTTCACTGCCAATGTACAATCTACCACCAAACCTAATGCCTAATGGAGGACAGTTAGGGCATGAAGCTTATGCTTGGACTCATGGAAGGCAACCTTACTAA 783 0.5185 MLNKRHTELSINESSGRSSGRDEDEDRDGGDEPKEGAVEVGARRPRGRPAGSKNKPKPPIFVTRDSPNALRSHVMEIASGADVAESIAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGPLVATGPVMVIAATFSNATYERLPLEDDDEGGSSAQGAGGNSPPAIGGSGGQLQSGIPDPSSLPMYNLPPNLMPNGGQLGHEAYAWTHGRQPY* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00832 260 Pfam Plants and Prokaryotes Conserved (PCC) domain 71 184 IPR005175 -
Pte11g00832 260 PIRSF ESCAROLA 2 260 IPR014476 GO:0003680
Pte11g00832 260 MobiDBLite consensus disorder prediction 1 65 - -
Pte11g00832 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 255 IPR014476 GO:0003680
Pte11g00832 260 FunFam AT-hook motif nuclear-localized protein 70 197 - -
Pte11g00832 260 CDD DUF296 71 154 IPR005175 -
Pte11g00832 260 Gene3D - 70 199 - -
Pte11g00832 260 MobiDBLite consensus disorder prediction 1 16 - -
Pte11g00832 260 SUPERFAMILY AF0104/ALDC/Ptd012-like 67 195 - -
Pte11g00832 260 ProSiteProfiles PPC domain profile profile. 67 205 IPR005175 -
Pte11g00832 260 MobiDBLite consensus disorder prediction 191 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00832 Pte-Chr11 9859534 9860660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00832 3 261 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 69.202 9.48e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00832 - - qsa:O6P43_021453 380.563