Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00824 ATGAGCTCTGTACTGCTCACCATGTTCTTGTATAAGAAAAGGAAAGCCAATGGAAAAAAATATGCCCAGGCTGATTTTCTGTGTGTGTTGAATATAGAAGTTACAGTTGTTGCTGGAGATTCTGCGGACACTGACAGACAAGTTCTGCTGAATCTGAAATCGTATCTACAAGAGACAAACCGTTTCAACACAGGACCCTATTCAGGATGGAATGACCACAGCAGTAATCCCTGCGATTGGCCAGGTGTCTTCTGCCGCTCTAATGGGACAACAACAAGGGTCACTGGTATTTACCTTTCTGACTGCAACCTCTCTGGTGAGATGTTCCAGCAGTTCTCGAAGCTCACTGAGCTCACCTACCTTGATCTTTCCAAGAACACACTCAGTGTTGTTCCACCTGATTTAAGTCTGTGTCAAAAGCTTGTGTATCTCAACCTCTCGCATAATATTCTCAAAGGAGAGTTGAACTTAACCGGGTTACATCGATTAGAGACATTAGACCTGTCTGTTAATAGGATTCATGGAGATATTAGGTTGCATTTTCCTGCAACCTGCCACAATCTGGTGACTCTCAATATTTCAGAGAATAACTTCACTGGTAGTATTGGTAAATCCTTATATCAGTGCTTGAAGCTACAGTACTTAGATTTGACCACTAACTACTTCCACGGAAACCTGTGGATGGGATTTTCAAGGCTGAAAGAGTTTTCAGTTTCTGAGAATTATCTGAGTGGTTCTATTCTTCCGTCCTTTTTCAATGGGAATTGTAATCTACAAGTTTTAGACCTGTCCCACAATAGTTTTTCTGGTCAGATTCCAAAGGAGGTTTCAAAATGCAATAACTTAGTGATGTTGAATGTTTGGGGCAACAATCTTACTGGTAAAATTCCCCCTGAGATAGGAGACATTTCATCCTTGGAACAATTATACTTGGGGAACAACAGTTTCCATAGGGATATTCCAGACACCCTTCAGAACTTGGAAAAGTTGACGTTTTTGGATTTCAGCAGAAACAGGTTTGGTGGAAAAGTACAAGAGATATTTGGGAAGATGACACAGCTGAAGTCTCTTCTGTTGCATTCAAATTTTTATACTGGAGGACTGTATTCTTCTGGACTTCTAAAGTTATCTAATATAGAAAGGATAGATTTAAGCCACAACAATTTCTCAGGTCCTTTGCCAGCTGAATTCTCACAAATGTCAAGTCTGAAGTTCTTGATGTTGCCCCATAACGATTTCTCAGGAATAATACCATCTGAATTTGGATATATGCCACGAATCCAATTACTTGATCTCTCTTTCAACATGTTGAATGGTTCAATTCCACCGAGCCTTGGGAATCTGAAGTCACTCTTAGGGTTGATGCTTACAAATAATTCATTGAAGGGCGAAATTCCCAATGAACTGGGGAACTGTACAAGTTTGTTGTGGCTTAACCTTGCAAACAACAAGTTGTCAGGGAACTTACCTTCGGAGTTAGCAAATATCGGAAGTAATATCATGTCAACTTTTGAATCTAACCGGCAGAGTGAAAGTCTTCTTGCTGGCTCAGCTGGATCATCTGTACGTACATCGCAAATCTCTGGTTATGTTCTGCTAAGCGGGAATCAGCTCATAGGGGAAGTTCCCTCTAGTATCGGCAAGTTGCAGAATATCAGTATGCTGCATCTGGATGGAAATAGTTTTTATGGACATATTCCTCCTGAGATTGGAGGAATGACACTTGTAGTCTTAAATGTATCCAGAAACAATTTCTCTGGTCAAATTCCCATGCGAATTGGAAACCTGGAATGTCTGCAGAATCTTGATTTTTCCCATAACGATTTTTCTGGGACATTTCCTGCGAGCTTGAACAACTTGAATGACCTCAACAAGTTTAATATCTCATACAACCCGTTCATCTCTGGGGTGGTTCCAACTACTGGACCGTTATCAAATTTTGCCAAAGATTCATACTTGGGTGACCCCCTTCTGATTTTTTCAAAGTTCATTGACAACTCCACGCATCAGTCTCCTGACAACAAAATGCCAAACGATCAGATTATAAGTGCAAAAAGGGCGTCTCGACCTTTTCTAATCTTAGCACTATCGTTAGTTGTCTTGCTATCTGGACTGGCGTTTGTCCTAGTCTGCTTAACAGTGAAAAGGTCATCAGTAGCGTCAGGCTATCTCTTGGAGGATATAAAATACGTGCATCACCTTGCAGCAAGTTCCAGTTCTTCCCCGTGTTCATCTGACACTACTGTTAAGACCATCCTTCTGGACAGAACTGCTTTTACACACGGTGACATCTTGAAAGCCACCGGAAATTTTTCAGAGGAGAGAGTTATTGGAAAAGGGGGATATGGAATTGTGTATAGAGGTGAATTACCTGATGGAAGACAAGTTGCAGTGAAGAAGCTTCAAAGGGAAGGTATTGTAGGTGAGAGGGAATTCAGAACTGAAATGGAAGTCCTAAGTGGGAATAGTTTCAGCTGGCCACATCCAAACCTTGTAACACTCTATGGTTGGTGCCTACATCAATCAGAGAAGATATTGGTCTATGAGTACATGGAAGGAGGAAGCCTGGAGGATCTTGTATCCGACAGAACAAGGCTAACATGGCGCAGGCGCATCGATGTGGCGATTGGTGTAGCGCGTGCATTAGTGTATCTTCATCATGAATGCTATCCTTCAATTGTGCACCGTGATGTGAAGGCAAGTAATGTCCTGCTTGATAAGAATGGCAAGGCAAGAGTGACAGATTTTGGGCTTGCTAGGGCAGTTGATGCTGGTGATAGCCATGTTACAACAATGGTAGCTGGGACAGTTGGCTATGTCGCCCCGGAGTATGGGCAAACCTGGAGAGCAACTACAAAAGGTGATGTGTATAGTTTTGGGGTGCTAGCAATGGAGCTAGCAACAGGTAGGAGAGCACTGGATGGAGGAGAAGAATGCCTGGTTGAATGGGCAAGGAGAGTCGTGGGGTATGGAAGAAATGAATTGAAATGTTCTGCAATACCTATGGAGGTGATTGGGTCTGCACTAGCTGAAGTTACAGAAGAAATGTGTGAGCTGTTAAGAATTGGACTTAAATGCACAGCTGAGGCACCACAGGCTAGACCTAACATGAAAGAGGTCTTAGCTATGTTGATTACGATACCAAATAATATCAACGGGGAACTTAGGCATGGCCTCGGCGAAAATCAGTACAGTTAG 3198 0.4234 MSSVLLTMFLYKKRKANGKKYAQADFLCVLNIEVTVVAGDSADTDRQVLLNLKSYLQETNRFNTGPYSGWNDHSSNPCDWPGVFCRSNGTTTRVTGIYLSDCNLSGEMFQQFSKLTELTYLDLSKNTLSVVPPDLSLCQKLVYLNLSHNILKGELNLTGLHRLETLDLSVNRIHGDIRLHFPATCHNLVTLNISENNFTGSIGKSLYQCLKLQYLDLTTNYFHGNLWMGFSRLKEFSVSENYLSGSILPSFFNGNCNLQVLDLSHNSFSGQIPKEVSKCNNLVMLNVWGNNLTGKIPPEIGDISSLEQLYLGNNSFHRDIPDTLQNLEKLTFLDFSRNRFGGKVQEIFGKMTQLKSLLLHSNFYTGGLYSSGLLKLSNIERIDLSHNNFSGPLPAEFSQMSSLKFLMLPHNDFSGIIPSEFGYMPRIQLLDLSFNMLNGSIPPSLGNLKSLLGLMLTNNSLKGEIPNELGNCTSLLWLNLANNKLSGNLPSELANIGSNIMSTFESNRQSESLLAGSAGSSVRTSQISGYVLLSGNQLIGEVPSSIGKLQNISMLHLDGNSFYGHIPPEIGGMTLVVLNVSRNNFSGQIPMRIGNLECLQNLDFSHNDFSGTFPASLNNLNDLNKFNISYNPFISGVVPTTGPLSNFAKDSYLGDPLLIFSKFIDNSTHQSPDNKMPNDQIISAKRASRPFLILALSLVVLLSGLAFVLVCLTVKRSSVASGYLLEDIKYVHHLAASSSSSPCSSDTTVKTILLDRTAFTHGDILKATGNFSEERVIGKGGYGIVYRGELPDGRQVAVKKLQREGIVGEREFRTEMEVLSGNSFSWPHPNLVTLYGWCLHQSEKILVYEYMEGGSLEDLVSDRTRLTWRRRIDVAIGVARALVYLHHECYPSIVHRDVKASNVLLDKNGKARVTDFGLARAVDAGDSHVTTMVAGTVGYVAPEYGQTWRATTKGDVYSFGVLAMELATGRRALDGGEECLVEWARRVVGYGRNELKCSAIPMEVIGSALAEVTEEMCELLRIGLKCTAEAPQARPNMKEVLAMLITIPNNINGELRHGLGENQYS* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00824 1065 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 183 1044 - -
Pte11g00824 1065 ProSitePatterns Protein kinases ATP-binding region signature. 777 800 IPR017441 GO:0005524
Pte11g00824 1065 FunFam Putative LRR receptor-like serine/threonine-protein kinase 351 512 - -
Pte11g00824 1065 Pfam Protein kinase domain 772 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00824 1065 Gene3D Ribonuclease Inhibitor 371 666 IPR032675 -
Pte11g00824 1065 Gene3D Transferase(Phosphotransferase) domain 1 851 1057 - -
Pte11g00824 1065 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Pte11g00824 1065 ProSiteProfiles Protein kinase domain profile. 771 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00824 1065 CDD STKc_IRAK 777 1044 - -
Pte11g00824 1065 Gene3D Ribonuclease Inhibitor 182 370 IPR032675 -
Pte11g00824 1065 SMART LRR_typ_2 549 573 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 327 350 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 303 326 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 424 447 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 376 399 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 160 187 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 256 279 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 448 472 IPR003591 -
Pte11g00824 1065 SMART LRR_typ_2 115 138 IPR003591 -
Pte11g00824 1065 FunFam Leucine-rich repeat receptor-like protein kinase 851 1054 - -
Pte11g00824 1065 Pfam Leucine rich repeat N-terminal domain 42 85 IPR013210 -
Pte11g00824 1065 SUPERFAMILY L domain-like 230 492 - -
Pte11g00824 1065 SUPERFAMILY L domain-like 531 647 - -
Pte11g00824 1065 SUPERFAMILY RNI-like 78 297 - -
Pte11g00824 1065 Gene3D Phosphorylase Kinase; domain 1 733 850 - -
Pte11g00824 1065 SMART serkin_6 771 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00824 1065 ProSiteProfiles Leucine-rich repeat profile. 117 138 IPR001611 GO:0005515
Pte11g00824 1065 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 249 344 - -
Pte11g00824 1065 SUPERFAMILY Protein kinase-like (PK-like) 749 1045 IPR011009 -
Pte11g00824 1065 Pfam Leucine rich repeat 378 437 IPR001611 GO:0005515
Pte11g00824 1065 Pfam Leucine rich repeat 232 292 IPR001611 GO:0005515
Pte11g00824 1065 Pfam Leucine rich repeat 97 149 IPR001611 GO:0005515
Pte11g00824 1065 FunFam Leucine-rich repeat receptor protein kinase MSP1 735 850 - -
Pte11g00824 1065 Gene3D Ribonuclease Inhibitor 41 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00824 Pte-Chr11 9499074 9503209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00824 439 648 Receptor kinase-like Gene Family AT5G07280 32.547 6.76e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pte11g00824 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00824 - - qsa:O6P43_022881 1310.05