Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00817 ATGGAGGGTAAGGAGATTCATCTGAACATAGGAAATTGTAAGTCCAGTAATGATCGATTCATTGATAGAAGCAAAGTGAAAATTTTGTTATGTGATAATGATAGCAAGAATTCTGAAGAGGTTTCGACGCTGCTCTCGAGATGCTCTTATCAAGTTACTTCTGTGAAGTCCGCTAGACAGGTAATTGATGCTCTGAATGCTGAGGGACCAGATATAGACATCATACTATCTGAAATTGATCTTCCTATGGCTAAAGGTATGAAGATGCTAAAGTACATCACACGTGATAAAGAATTGCGCCGCATTCCTGTCATAATGATGTCGGCACAAGATGAAGTTTCAATTGTTGTCAAGTGCTTGAGACTTGGAGCTGCCGACTATCTTGTGAAGCCTCTACGCACAAATGAATTGTTAAATTTGTGGACGCACATGTGGAGAAGACGGCGTATGCTTGGGATGGTGGAGAAGAAGGTCCTGAGCTATGACTTTGATCTCATGGCATCTGATCCAAGTGATGCCAACACAAACAGTACTACCTTGTTCTCGGATGACACAGATGACAAGTCCCATAGAAGCACAAATCCAGAGACTGCAATGCCAATGCAACACGAGGATGAGTTCATTGTTGCTGCTGTTGCTGGTACTGATAATGAGCTTTCACATGCTCATGTATCAGGGTATCAACCTGATGTGCCAGGAATTAGTGATAGGATCAGTGATCGTCGAACTGAACTTGCTGGAAATATTTCTTCTGGTCCAAAAAAGAGTGAACTAAGGATCGGCGAGTCTTCTGCCTTCTTAACTTATGTGAAGTCACCCATAGCAAGAAGCAATTCCCAGTGGATAGTTACTGTGGATGATAGCATTGCTCAACGTGAACAGGTGAAGGATAAAAAACGAAAATGCAGCTCAGAGGATGCCACTCATTTGCCATTGCATGTCAGTGGGGAGATATGGGACAACCATTCACGAGAAGACTTACCTAGCAGTAATAGCATCCCAGATTCTCTTGCCCTTGAGAGATCGTGTACTTCCCCCACCTCAACGGATCATTCACTGAAAAGGGATTTGGAGGAAAAATATTTGCCTCGGGGGATGCTTCACCCAAAAAGTGGGAGTCGAGGTCCTGTTCTTGAGATGGCATACTTGCCTCCCCAGAACCCTTATCCATATTACGTGTCCGGAGTTGTGAATCAGGTTATGATGCCATCATCAGCACATCTATATCCAAACAACATGCAGGACCTGCAAAATCACGGCATGATGGCACAGTATAACCACCATATTGCTCAATGTTCTCCACATGCAAATGGGATCACATCCTTTCCGTACTACTCAGTTGGGATTTGTTTACAACCTGGTCAAATGTCTGTGAATCAACCATTGCCCTCATATGGAAATTCAAGTAATTCAGAAGTAAAATTGAGTAAAGTTGATCGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGAAAGGAGCGTTGTTTTGATAAGAAAATTAGGTATGTTAATAGGAAACACCTTGCAGAGAGGAGGCCGCGTGTGCGTGGGCAGTTTGTGAGGAAGGTTAATGGTGTTAGTGTGGATCTTAATGGAGAACCCACTTCTGCTGACTTTGAAGAGGAAGAGGATGAGGAGGACCGTGCTGGGAGAGAGTCATCGCCAGAGGATAATGTCCGAGGATAG 1689 0.4358 MEGKEIHLNIGNCKSSNDRFIDRSKVKILLCDNDSKNSEEVSTLLSRCSYQVTSVKSARQVIDALNAEGPDIDIILSEIDLPMAKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGMVEKKVLSYDFDLMASDPSDANTNSTTLFSDDTDDKSHRSTNPETAMPMQHEDEFIVAAVAGTDNELSHAHVSGYQPDVPGISDRISDRRTELAGNISSGPKKSELRIGESSAFLTYVKSPIARSNSQWIVTVDDSIAQREQVKDKKRKCSSEDATHLPLHVSGEIWDNHSREDLPSSNSIPDSLALERSCTSPTSTDHSLKRDLEEKYLPRGMLHPKSGSRGPVLEMAYLPPQNPYPYYVSGVVNQVMMPSSAHLYPNNMQDLQNHGMMAQYNHHIAQCSPHANGITSFPYYSVGICLQPGQMSVNQPLPSYGNSSNSEVKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKHLAERRPRVRGQFVRKVNGVSVDLNGEPTSADFEEEEDEEDRAGRESSPEDNVRG* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00817 562 Pfam CCT motif 481 523 IPR010402 GO:0005515
Pte11g00817 562 Gene3D - 26 223 - -
Pte11g00817 562 ProSiteProfiles Response regulatory domain profile. 27 145 IPR001789 GO:0000160
Pte11g00817 562 MobiDBLite consensus disorder prediction 325 350 - -
Pte11g00817 562 MobiDBLite consensus disorder prediction 321 353 - -
Pte11g00817 562 MobiDBLite consensus disorder prediction 174 198 - -
Pte11g00817 562 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 223 IPR045279 GO:0009736
Pte11g00817 562 SMART REC_2 26 141 IPR001789 GO:0000160
Pte11g00817 562 SUPERFAMILY CheY-like 24 152 IPR011006 -
Pte11g00817 562 MobiDBLite consensus disorder prediction 536 551 - -
Pte11g00817 562 Pfam Response regulator receiver domain 28 139 IPR001789 GO:0000160
Pte11g00817 562 MobiDBLite consensus disorder prediction 527 562 - -
Pte11g00817 562 ProSiteProfiles CCT domain profile. 481 523 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00817 Pte-Chr11 9413362 9418322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00817 11 562 Response Regulator Gene Family AT5G61380 50.869 7.45e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pte11g00817 Response_reg 2.9e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00817 K12127 - qsa:O6P43_022870 712.605