Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00814 ATGTTTCAGGTTTGGAGGATCATCATAAAATCCCTGTCTATTGTTGGTATTGTGTCCGTTACTAAGAGGCTTTCACTGGTTGCGATGGCAGCAGAGTTTTGTCAGAAAATGGAAAACATTCTTAGTCTTTGTCACAAGGAGGATGAATCGATGGACTTGCCACCTGGGTTTCGGTTTCACCCCACAGATGAAGAACTCATAAGCCATTACCTACACCCCAAGGTAATCAACACACATTTCACTTGCAGAGCTATTGGATTTGTGGACTTGAACAAGTCTGAGCCCTGGGACTTACCCTGGAAAGCAAACCTGGGAGAAAAAGAGTGGTACTTTTTTTGTATCAGAGACAGAAAGTATCCAACAGGTTTGAGAACCAACAGAGCCACTGAAGCTGGATACTGGAAAGCAACAGGGAAAGACAAAGAGATCTACAAAGGAAAATCCCTAGTTGGAATGAAGAAAACTTTGGTTTTCTACAAAGGGAGAGCACCTAAAGGAGAAAAAACCAATTGGGTTATGCATGAGTACAGGTTAGATGGTAAACTCTCAGTTCACATCCTTCCCAAATCTGCAAAAAATGAGTGGGTGATAAGCAGAGTATTTCAGAAGAGTATAGGTGGAAAGCAGACTCATATTTCTGGGATAATGAGATTGGGTTCTTATGGAAATGAATTGGGTCCTTCCAGGTTACCACCATTAAGGGATCCCTCTTCTCCCATTGACAAGACCAAGCCGTTGGCCGAAATGACCTACGTGCCCTGCTTCTCCAACCAAATCCATGTCCAAGGAAACCAAGAAGGGATAATGGATGATTGCTTTAACAACCCTCTTAATATGGTTGCTACAAATCCTTCAGAAACTTTTCCAAGGATTCAGCTGTCCAGTTCTTTGTTTTCTACAACTCAAAGCAACACATTCTCAGAAAGCCTTTCACTGTCTGGTTCTGTTTATGATGTGCAAGACGACTCTTTCCTCAGGGCTTTCCTTCAGAACCATGGAACCAACATGAGGAATTTAAAAACTGAGAAGGATATGGCAAGTCTCTCTCAAGAGACAGGCCTGACAACCACTGATATGAACCCTGAGATATCTTCAATGGTGTCAAATTTTGAAATGAGTAGGATGCCATTTGCTCAAGAGGCACAGCCTCTTAATTTCAGCTGGACCAGTGGAATTTGA 1179 0.4241 MFQVWRIIIKSLSIVGIVSVTKRLSLVAMAAEFCQKMENILSLCHKEDESMDLPPGFRFHPTDEELISHYLHPKVINTHFTCRAIGFVDLNKSEPWDLPWKANLGEKEWYFFCIRDRKYPTGLRTNRATEAGYWKATGKDKEIYKGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLDGKLSVHILPKSAKNEWVISRVFQKSIGGKQTHISGIMRLGSYGNELGPSRLPPLRDPSSPIDKTKPLAEMTYVPCFSNQIHVQGNQEGIMDDCFNNPLNMVATNPSETFPRIQLSSSLFSTTQSNTFSESLSLSGSVYDVQDDSFLRAFLQNHGTNMRNLKTEKDMASLSQETGLTTTDMNPEISSMVSNFEMSRMPFAQEAQPLNFSWTSGI* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00814 392 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 52 313 - -
Pte11g00814 392 FunFam NAC domain-containing protein 100-like 62 207 - -
Pte11g00814 392 SUPERFAMILY NAC domain 49 203 IPR036093 GO:0003677|GO:0006355
Pte11g00814 392 Pfam No apical meristem (NAM) protein 54 178 IPR003441 GO:0003677|GO:0006355
Pte11g00814 392 ProSiteProfiles NAC domain profile. 53 203 IPR003441 GO:0003677|GO:0006355
Pte11g00814 392 Gene3D NAC domain 62 206 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00814 Pte-Chr11 9360711 9362400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00814 51 383 NAC Transcription Factor Family AT5G07680 57.143 2.42e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte11g00814 NAM 2.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00814 - - qsa:O6P43_022865 483.026