Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00812 ATGCTGGAAATCAAAGACTCCGCCATCAAGCTATTTGGGAAGGAGATTCCTTTGCCTGTTGATTGTGAAGTTCAGTCAATCGCAGGCGATGGTTCGTCTTCTTCTGCTGTGACGAATATGGACATCTGCGAAGAACAAGAGGAACAGGGAGATAAAGACACAGCTGACAAGGATTCAACTTCAGGAAAAGCAGCTGAAGTTCCTGCAGATCAAGAGGATGATCTGACTGAGAACTCTGATGACACTTCCAACTCAGAATTATTGGCAGACAGTACTACCGACCCTAAAACAGATGAAGAAACTGCAGGAAAAAAATCTTCCAAGACACAGAAGGAGCAGAATGATTCAAGCAATTCCCAAGATAAACCCATGAAGAAGCCTGATAAAATACTCCCATGTCCTAGATGCAATAGCATGGATACAAAATTCTGTTACTATAATAATTACAACGTCAATCAGCCGAGACATTTCTGCAAGGCATGTCAAAGGTATTGGACTGCAGGAGGTACAATGAGGAATGTGCCAGTGGGAGCTGGAAGAAGGAAAAACAAGAACTCTGCCTCACACTATCGTCACATCACCATTTCGGAGGCTCTTGAAGCAGCTACGATTCATTCTCCAAATGGAACACACCTGCCAACATTGAAAAGCAATGGGAGAGTCTTGAGCTTTGGCTTAGATGCATCTATTTGTGATTCCACGGCTTCTGTCCTGAATCTTACAGCTAAGAAGGTTATCAATGGTGCCAAAAATGGATATCATAGCTTTGAAGAACAAAGAATTCCAGTTCCTTGCAGAGGCAAAGAAAATCGTGATAGTTCTAATGCTTCTTCTGTCACAGTTCCAACTTCAACGGAAGATATTGTGAAAAAACACTCGAAAGAGTCATCATTTCCAGCCATTAATGGTCATCCTGCTCAGATTCCATGCCTTCCTGGTCTTCCATGGCCTTATCCTTGGAATTCTGCAGCTCCTCCACCTGGTTTTTATCCCCCTGGATCACCTCTTCCATTTTACCCAGCTCCTTTGTGGAACTGTGGTGTCCCCTGCAACTGGAACATCCCCTGGTTATCACCCTCTTGTCCGAGCCAAAACTCTCCAAGTTCTGGTCCAAATTCTCCTTTGGGGAAGCATTCAAGGGATGGAGACATGCTTAAAATGGATAATTTGGAAAAAGAAGATTTGCCGAGACCCAAAAACGGATGTGTTCTGGTTCCAAAAACATTGAGAATAGATGATCCAAGTGATGCTGCAAAGAGTTCTATATGGGCAACCCTTGGGATTAAGAATGAAGTGGTGGGTGGAGGTGGAATGTTTAAATCTTTCCAACCAAAGAGTGATGAAAAGAATCATGCCATAGATGACTCTCTGGTGCTAAGGGCCAATCCAGCAGCCTTGTCTAGATCGCTTCACTTCAGAGAGAACTCTTAA 1431 0.4354 MLEIKDSAIKLFGKEIPLPVDCEVQSIAGDGSSSSAVTNMDICEEQEEQGDKDTADKDSTSGKAAEVPADQEDDLTENSDDTSNSELLADSTTDPKTDEETAGKKSSKTQKEQNDSSNSQDKPMKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALEAATIHSPNGTHLPTLKSNGRVLSFGLDASICDSTASVLNLTAKKVINGAKNGYHSFEEQRIPVPCRGKENRDSSNASSVTVPTSTEDIVKKHSKESSFPAINGHPAQIPCLPGLPWPYPWNSAAPPPGFYPPGSPLPFYPAPLWNCGVPCNWNIPWLSPSCPSQNSPSSGPNSPLGKHSRDGDMLKMDNLEKEDLPRPKNGCVLVPKTLRIDDPSDAAKSSIWATLGIKNEVVGGGGMFKSFQPKSDEKNHAIDDSLVLRANPAALSRSLHFRENS* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00812 476 MobiDBLite consensus disorder prediction 27 42 - -
Pte11g00812 476 ProSiteProfiles Zinc finger Dof-type profile. 131 185 IPR003851 GO:0003677|GO:0006355
Pte11g00812 476 MobiDBLite consensus disorder prediction 270 286 - -
Pte11g00812 476 MobiDBLite consensus disorder prediction 25 131 - -
Pte11g00812 476 MobiDBLite consensus disorder prediction 361 375 - -
Pte11g00812 476 PANTHER CYCLIC DOF FACTOR 2 5 476 IPR045174 GO:0003700|GO:0006355
Pte11g00812 476 ProSitePatterns Zinc finger Dof-type signature. 133 169 IPR003851 GO:0003677|GO:0006355
Pte11g00812 476 MobiDBLite consensus disorder prediction 361 383 - -
Pte11g00812 476 Pfam Dof domain, zinc finger 128 185 IPR003851 GO:0003677|GO:0006355
Pte11g00812 476 MobiDBLite consensus disorder prediction 265 301 - -
Pte11g00812 476 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00812 Pte-Chr11 9288771 9291858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00812 1 474 C2C2-Dof Transcription Factor Family AT3G47500 46.247 9.58e-110 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte11g00812 zf-Dof 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00812 - - qsa:O6P43_022858 624.78