Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00807 ATGAGTGATCGCCTGGTTTTGTGTGTTGACCGGCTCATAACTTCTGACAGTTTGCAATCCTTGGAGGAAGGAGCTGTGGCCTCTGAAATTTCCGGGCCATCCGGAGATGCTTCAGTTGATCCCCATCCTTCTGCTAATGATGTCAATGGAGTTGAGGAGGAGAATGCCCTAGAAGAGGAGCAGCCTCTGATTCAATTGGTGGAGTGCCGCATTTGCCAGGAGGAGGATAGCATTAAGAACTTTGAAATTCCTTGCGCTTGCACGGGCAGTTTGAAGTTTGCTCATAGGAAATGCGTCCAACGATGGTGCAATGAGAAAGGAGATATAACTTGTGAGATCTGCCATCAGTCCTATCATCCTGGCTATACTGCCCCACCACCATCCCAGCCAGAAGATACTATAATTGATATCAGGAAAGGTTGGACAATCTCTGGTTCCCCCTTGGACTTGCAGGACCCTCGAGTTTTGATGATGGCTGCAGCAGAACACCGTTTTCAAGAGGCCGAGTATGATGATTATGGTGATGGTGGTGCCAGCGGGGCTGCATTTTGCCGCTCTGCTGCTTTAGTTTTACTGGCTCTTCTACTCTTGAGGCATGCTTTATCCTTCACTAATGCTGATGACGAGGATGACGTTTCTGCATATTTCTCTCTTTTCTTGCTAAGAGCAGCTGGCTTTCTCCTCCCATGCTACATTATGGCTTGGGCTATCAGTATATTACAGAGACGAAGGCAAAGACAGGAAGCTGCTGCACTGGCAGCTACAGAAGTTGCATATATGCTGCAGGCGGAGCAACATCACCCACGCTTGCCATTTGCAGTACCACCTGGGGCAGCGGTGGCAGCCCATCAAGAACTGGTTCAGTAA 867 0.4902 MSDRLVLCVDRLITSDSLQSLEEGAVASEISGPSGDASVDPHPSANDVNGVEEENALEEEQPLIQLVECRICQEEDSIKNFEIPCACTGSLKFAHRKCVQRWCNEKGDITCEICHQSYHPGYTAPPPSQPEDTIIDIRKGWTISGSPLDLQDPRVLMMAAAEHRFQEAEYDDYGDGGASGAAFCRSAALVLLALLLLRHALSFTNADDEDDVSAYFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAYMLQAEQHHPRLPFAVPPGAAVAAHQELVQ* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00807 288 FunFam RING/FYVE/PHD zinc finger protein 57 125 - -
Pte11g00807 288 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 247 IPR033275 -
Pte11g00807 288 MobiDBLite consensus disorder prediction 26 48 - -
Pte11g00807 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 124 IPR013083 -
Pte11g00807 288 Pfam Protein of unknown function (DUF3675) 120 237 IPR022143 -
Pte11g00807 288 ProSiteProfiles Zinc finger RING-CH-type profile. 61 121 IPR011016 GO:0008270
Pte11g00807 288 CDD RING_CH-C4HC3_MARCH 69 115 - -
Pte11g00807 288 SMART ringv_2 68 115 IPR011016 GO:0008270
Pte11g00807 288 Pfam RING-variant domain 69 114 IPR011016 GO:0008270
Pte11g00807 288 SUPERFAMILY RING/U-box 67 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00807 Pte-Chr11 9176736 9179217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00807 68 115 C3H Transcription Factor Family AT2G37950 43.137 4.08e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00807 - - qsa:O6P43_022851 372.089