Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00803 ATGAAGAAGAGTCAGGTAGTGGTGAAAAGATCAGATATATCGAGCTTGAGGAGTACTTCTCGCATTTCATCTTCAGTGGAAGGAACCATCGGATACGGGGCATGTCAAAAGAATCATGCAGCTAATATTGGAGGGTATGCAGTGGATGGCTGCAGAGAATTCATGGCCAGTGGAGAACAAGGGACAAGTGGGGAACTTAACTGTGCAGCTTGCGGCTGTCACAGAATTTTCCACAGAAGGGAGATGGAAACCGAGGTGGTCTATATTGCAGTCTTGCTTATCCAAAAGATTGATTCCATGAGAGGTTCCAAAAAAGCAGCTGTTTCTTTCCTTGTTTCTGAGTGGTATTACCTGCAGCTTGAATTTGAGGCACTTAATGGAGCTGATAAAGGAACATTAGAGACGTATGTAATTCTTTCACTTCAGCATTTCAAGTATTATCCTTCTTGA 450 0.4289 MKKSQVVVKRSDISSLRSTSRISSSVEGTIGYGACQKNHAANIGGYAVDGCREFMASGEQGTSGELNCAACGCHRIFHRREMETEVVYIAVLLIQKIDSMRGSKKAAVSFLVSEWYYLQLEFEALNGADKGTLETYVILSLQHFKYYPS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00803 149 Pfam ZF-HD protein dimerisation region 31 82 IPR006456 -
Pte11g00803 149 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 3 98 - -
Pte11g00803 149 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 32 82 IPR006456 -
Pte11g00803 149 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 32 81 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00803 Pte-Chr11 9154462 9155609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00803 1 87 Zinc finger-homeobox gene family AT3G28917 62.921 1.02e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte11g00803 ZF-HD_dimer 1.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00803 - - cave:132173518 124.02