Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00801 ATGGGGAGGCCACCATGCTGTGACAAAGCTGGTATTAAGAAAGGTCCTTGGACACCAGAGGAAGACATCTTATTGGTCTCTTACATTCAGGAACATGGACCTGGGAATTGGAGATCAGTTCCAAATAATACAGGTTTGCTTAGGTGCAGTAAGAGTTGTAGACTTAGATGGACTAATTATCTGCGGCCTGGTATCAGAAGAGGTAACTTCACCGATCAGGAGGAGAAGATGATAATTCATCTCCAAGCTCTTCTAGGTAACAGATGGGCTGCCATAGCCTCCTACCTCCCACAGAGAACAGACAATGATATCAAAAATTATTGGAACACACATTTGAAGAAGAAACTGGAAAAGCTTCAAACAGGGAAGGACGGCCATGACAAAGATGGATTCTCAACTTCACAGTCAAAGGGTCAGTGGGAGAGAAAGCTTCAAACAGATATTCACATGGCCAAGCAAGCCTTGCGTGAGGCTTTGTCACTTGACAAAACAAGTTATCAGCCATTGCCAGCTGCAGACTCTAATCCCTCTAACACAACTAGAACATATCAACCATCACCACCACCACCGCCTTCATCATCGTCATATGCTTCAAGTGCAGAAAATATAGCACGGTTGCTTGAGAACTGGATGAAGAAGCAGCCTCAGAAATCAGTTCAATCAATTTCAGAGCAAAGTGAAGGCACGCAAAGTGGTACGGCTACCACACCCAATGCTTTTGACACTTTCTGGGGTTTTCACTCTTCCAACTCTGATGTCTCTGATCAATCTGGATCGGCTGATGACAACACAGTGATGACACCTGATCAGACTGGCCTCCACCAAGTCGAAAGTAGGCCTAATTTGGAGGCTGCACCAGTCCCTCTCATATTATTAGAGAAATGGCTTCTTGATGACTGTGCTGTTCAAGTTCAAGGCCGTGAAAATCTGATTACCATGTCTGTAGAAGAGAATTCAGCAGGGTTGTTCTATGTACAACAAATTAATTAG 990 0.4424 MGRPPCCDKAGIKKGPWTPEEDILLVSYIQEHGPGNWRSVPNNTGLLRCSKSCRLRWTNYLRPGIRRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLEKLQTGKDGHDKDGFSTSQSKGQWERKLQTDIHMAKQALREALSLDKTSYQPLPAADSNPSNTTRTYQPSPPPPPSSSSYASSAENIARLLENWMKKQPQKSVQSISEQSEGTQSGTATTPNAFDTFWGFHSSNSDVSDQSGSADDNTVMTPDQTGLHQVESRPNLEAAPVPLILLEKWLLDDCAVQVQGRENLITMSVEENSAGLFYVQQIN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00801 329 CDD SANT 69 112 IPR001005 -
Pte11g00801 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 241 - -
Pte11g00801 329 CDD SANT 16 61 IPR001005 -
Pte11g00801 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pte11g00801 329 MobiDBLite consensus disorder prediction 212 267 - -
Pte11g00801 329 Gene3D - 13 66 - -
Pte11g00801 329 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte11g00801 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pte11g00801 329 MobiDBLite consensus disorder prediction 119 142 - -
Pte11g00801 329 MobiDBLite consensus disorder prediction 166 198 - -
Pte11g00801 329 MobiDBLite consensus disorder prediction 213 267 - -
Pte11g00801 329 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pte11g00801 329 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte11g00801 329 FunFam MYB-related transcription factor 13 66 - -
Pte11g00801 329 FunFam Transcription factor MYB30 68 126 - -
Pte11g00801 329 MobiDBLite consensus disorder prediction 167 181 - -
Pte11g00801 329 SMART sant 13 63 IPR001005 -
Pte11g00801 329 SMART sant 66 114 IPR001005 -
Pte11g00801 329 Gene3D - 68 144 - -
Pte11g00801 329 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte11g00801 329 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00801 Pte-Chr11 9118298 9120523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00801 1 306 MYB Transcription Factor Family AT5G62470 50.286 2.47e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte11g00801 Myb_DNA-binding 2.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00801 K09422 - zju:107407717 432.18