Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00787 ATGGAAGAAGCATTCAGGAGACTCAACGGTCTAAGCCCAACGCCTGAAGCCGAATCCATTTCTAGTTACCAGAATAAGTACACACACGCTGCAGCGACTAATAGTAATCACAAGAGGGCGCAGCGAGATCAAAATGGAACCTCCGGTGGTACAATGAGGTATCGAGGTGTACGACGCAGACCATGGGGACGTTATGCTGCTGAGATAAGAGACCCTCAATCCAAGGAACGTAGATGGCTTGGTACCTTCGACACTGCCGAGGAAGCTGCTTGTGCTTACGACTGTGCTGCCAGAGCCATGCGGGGGCTGAAGGCTAGGACAAACTTTGTCTACCCGACTTCACCTACTCATTCAGCGAGCAGTGATCATCACCACCTTCCTCAGTTTTCTTTTGGCAGGCAGAGTCTTACTCAGCAGTCTTTCAAGGTTAATCAACACAGTCGTCATTTTGGTCATGCAAATTGGTCAGGTGTGTCTGGCGCTCCAACGGGGTCTCATAATTTATCATTAGCTGGTTCATCCGTACAAGCACAAAAAAACTCTGGCTTAAACATGTTTCTCCTACGTAACCTGCTTAACTCTTCTCCTAACCCTTCATCGATGTCATCTACTCAACCATACTCTGATCAGTCACTTCTCGTCAACGACGTTTCTTCGTCTTCGTCATTATCTTTTTCAACATCACCTTCTTCATGTTTGCACTCTTCATCCTTGCCTAAGCCTACTTGCCTCCCTGGATGTTCAGTTATGAATTCTTCTGACTTCAATTGTAGTACTTTATCTGGAGGTAGCAGTTCCATGAAAATGAACCTACCAACGAGTGGCACAAGCTCTACTTTCTGTGACGATGATATCAAAATGAGTACTGGAATTGTTAATAACTGCGTCTCTGAGTTCTTCCCAAGAGAATCATCGGACACAGGCTTGCTGGAAGAAGTTATTCATAGGTATTTCCCTCAAAAACCATCCAAAACAATAATTCCGGCTGCCAAGGAGTCCTTTTCATCTCCCAAGGATATTGGTACTTCACAGGTGCTGTCCCTCATGTCTATCTCAAGCGCTGCTCATAGCTATAATGGGACAAGGGGAGGGTTTGTTAAGAACGAGGGTTTTGGTTTAGGTTGCCAGACTAGCATGCTGCATCCATTTGAGAGTTTCAATGATGTTAATGACACACAGATGATGACTCTTGGGAACGAAGAAACGCAGCTTATGTTAAATGGTGGGGAGCTTGCTGTGATGGATGACATTTTTCAGTACCCTGAGATGCTTGGTGCCTATGCTTCGAACATGCAGAACGATTTCTAG 1308 0.4549 MEEAFRRLNGLSPTPEAESISSYQNKYTHAAATNSNHKRAQRDQNGTSGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPTHSASSDHHHLPQFSFGRQSLTQQSFKVNQHSRHFGHANWSGVSGAPTGSHNLSLAGSSVQAQKNSGLNMFLLRNLLNSSPNPSSMSSTQPYSDQSLLVNDVSSSSSLSFSTSPSSCLHSSSLPKPTCLPGCSVMNSSDFNCSTLSGGSSSMKMNLPTSGTSSTFCDDDIKMSTGIVNNCVSEFFPRESSDTGLLEEVIHRYFPQKPSKTIIPAAKESFSSPKDIGTSQVLSLMSISSAAHSYNGTRGGFVKNEGFGLGCQTSMLHPFESFNDVNDTQMMTLGNEETQLMLNGGELAVMDDIFQYPEMLGAYASNMQNDF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00787 435 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Pte11g00787 435 FunFam Ethylene-responsive transcription factor 2 52 111 - -
Pte11g00787 435 SUPERFAMILY DNA-binding domain 53 110 IPR016177 GO:0003677
Pte11g00787 435 Gene3D AP2/ERF domain 52 111 IPR036955 GO:0003700|GO:0006355
Pte11g00787 435 MobiDBLite consensus disorder prediction 1 54 - -
Pte11g00787 435 CDD AP2 53 109 IPR001471 GO:0003700|GO:0006355
Pte11g00787 435 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 36 203 - -
Pte11g00787 435 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Pte11g00787 435 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Pte11g00787 435 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Pte11g00787 435 Pfam AP2 domain 53 102 IPR001471 GO:0003700|GO:0006355
Pte11g00787 435 MobiDBLite consensus disorder prediction 14 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00787 Pte-Chr11 8956829 8958136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00787 51 126 AP2-EREBP Transcription Factor Family AT1G24590 84.211 1.63e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte11g00787 AP2 3.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00787 - - qsu:111992468 251.906