Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00782 ATGGCTTTGTTAATTTGTAACCTACAACCTTCTTCCTTGTACTCTTATCTTAACTACAAGCATAAGAAACCTGTGCTCATAGAACACGATAGACGCCTTCATTTGAATGGGATATCCAGACAGAGACTTCGTCCACCAACACTGTCTTTTGGGCCTAGGCGCGTGTTTCTGCATCCTCCGAAATCAGCTTCAATTAATGGACTTTCTATTGAGAGCAATCCTGAGGGTTTAGATGAAGCCCATGAAGTGGGAAATGTTGAATTTTTTGAAAAGTTAAAGAAATGGGGTCTTCGGCTTCGTTCAATATTGCCTGGTGGAAGCTGGTGGAGCTTTGCTGATGAAGATGTTGAGCTTAAGCTTTTGGCCGAGCCAGTGACTGTGTGGAGGGCACTGGCTAAAATGTGGGAATTGATAGCTCGAGACAGAGTGGTTATCTATGCTGCCTTCTCTGCTCTAATTATTGCTGCTATTTCGGAGATTTCTATTCCACATTTCTTGACAGCATCCATTTTCACAGCACAGAGTGGAGACGTCTCTGTCTTCTATAGGAATGTTCGTCTCTTGATTCTGCTATGTGTAACTTCGGGAATATGCAGTGGTATTAGAGGCTGCTGTTTTGGTATTGCAAACATGATTCTGGTTCAGAGAATGCGGGAGGAATTGTACTCGTCTCTTCTTCTTCAGGATATTTCCTTTTTTGACACTGAAACAGTAGGTGATCTGACAAGTAGGCTTGGGGCTGATTGTCAGCAAGTATCGCGAGTTATAGGAAACGATCTCAACTTGATACTGCGCAATGTCCTTCAGGGCACAGGTGCATTGATCTACTTGTTGATTTTGTCCTGGCCACTTGGTTTGTGTACATTGATGATTTGCTCTATTTTATCAGCAGTTATGCTGATTTATGGAAGGTACCAGAAAAAGGCAGCAAAGCTGATACAGGAGTTCACTGCTTCTGCCAATGATGTAGCTCAAGAGACATTCTCTCTGGTCAGAACTGTTCGCGTCTATGGGACAGAGGAAGAAGAACTAGGCAGGTACAAGTCATGGCTGGGAAAACTTGCTAGGATAAGCTTACGTCAGAGTGCTGGCTATGGTTTATGGAATTTCAGCTACAACATCCTATATCATTCAACTCAAGTTATTGCTGCGCTGTTCGGAGGACTTTCCATACTATCAGGTCAGATAACGGCGGAGAAACTCACCAAGTTTCTGTTATACAGTGAATGGTTGATTTATTCAACATGGTGGGTGGGAGACAATATATCCTCATTGATGCAATCTGTTGGGGCCAGTGAAAAGGTCTTTCAGCTGATGGATCTTTCTCCCAGCGAACAATTCAAAGCACAAGGACTAACATTGAAGAAGCTAATAGGACATATTGAGTTCGTTGATGTATCTTTTCACTATCCTTCCAGGCAGATGGTTCCAGTACTGCAGCATGTGAACATAATTGTGCATCCGGGTGAAGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGGAAAAGCACACTCGTGAACCTTCTGCTCCGTCTATATGAGCCAGGGGAAGGTCAGATTTTAATTGATGGCATCTCTCTTAAAGAGTTAGACGTCATGTGGTGGAGAGAAAGGGTTGGATATGTGGGACAGGAACCCAAACTTTTCCGAATGGATATCAAGTCCAACATTGGGTATGGTTGCTCCAAAGAAACAAAACAAGAAGATATTGAATTGGCTGCGAAGCAGGCATATGCTCATGACTTCATCTTGTCTCTTCCTAATGGCTATGAAACAATTGTTGACGATGATCTATTAAGTGGTGGACAAAAGCAACGAATTGCTATTGCTAGGGCGATCCTTAGAGACCCCACGGTACTGATACTCGACGAAGCTACTAGCGCTTTGGATGCAGAGAGTGAACACAATGTCAAGGGTGTTCTTCGTGCAGTTAGAAGCGAGTCAAAAAGTAGTAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACGATACAAGCTGCTGATAGGATTGTGGTGATGGATGGGGGTCGAGTAGTTGAGCAGGTCCTCGGCCAAGTTAGTATTGCAGCCATATGTGCTGATAGATATTGCATCTATTTGGTTCAAGAAAACTGA 2115 0.434 MALLICNLQPSSLYSYLNYKHKKPVLIEHDRRLHLNGISRQRLRPPTLSFGPRRVFLHPPKSASINGLSIESNPEGLDEAHEVGNVEFFEKLKKWGLRLRSILPGGSWWSFADEDVELKLLAEPVTVWRALAKMWELIARDRVVIYAAFSALIIAAISEISIPHFLTASIFTAQSGDVSVFYRNVRLLILLCVTSGICSGIRGCCFGIANMILVQRMREELYSSLLLQDISFFDTETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLILSWPLGLCTLMICSILSAVMLIYGRYQKKAAKLIQEFTASANDVAQETFSLVRTVRVYGTEEEELGRYKSWLGKLARISLRQSAGYGLWNFSYNILYHSTQVIAALFGGLSILSGQITAEKLTKFLLYSEWLIYSTWWVGDNISSLMQSVGASEKVFQLMDLSPSEQFKAQGLTLKKLIGHIEFVDVSFHYPSRQMVPVLQHVNIIVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPGEGQILIDGISLKELDVMWWRERVGYVGQEPKLFRMDIKSNIGYGCSKETKQEDIELAAKQAYAHDFILSLPNGYETIVDDDLLSGGQKQRIAIARAILRDPTVLILDEATSALDAESEHNVKGVLRAVRSESKSSRSVIVIAHRLSTIQAADRIVVMDGGRVVEQVLGQVSIAAICADRYCIYLVQEN* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00782 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 461 700 IPR003439 GO:0005524
Pte11g00782 704 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 147 427 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte11g00782 704 FunFam Multidrug ABC transporter ATP-binding protein 453 690 - -
Pte11g00782 704 CDD ABC_6TM_TAP 148 435 - -
Pte11g00782 704 SMART AAA_5 488 677 IPR003593 GO:0016887
Pte11g00782 704 ProSitePatterns ABC transporters family signature. 599 613 IPR017871 GO:0005524|GO:0016887
Pte11g00782 704 Pfam ABC transporter transmembrane region 149 412 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte11g00782 704 SUPERFAMILY ABC transporter transmembrane region 133 445 IPR036640 GO:0005524|GO:0016020
Pte11g00782 704 Pfam ABC transporter 479 627 IPR003439 GO:0005524
Pte11g00782 704 PANTHER ABC TRANSPORTER B FAMILY 140 681 IPR039421 -
Pte11g00782 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 453 681 IPR027417 -
Pte11g00782 704 Gene3D - 452 693 IPR027417 -
Pte11g00782 704 FunFam ABC transporter B family member 26, chloroplastic 127 446 - -
Pte11g00782 704 Gene3D ABC transporter type 1, transmembrane domain 128 447 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00782 Pte-Chr11 8917394 8924387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00782 187 681 Calmodulin-binding Proteins AT2G36910 30.669 4.66e-60 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00782 - - cave:132177291 1003.82