Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00757 ATGTCATCGCTGAACCATCTCTTTGATCTCTCGGATCAGATATGTTATGTACAATGCGGATTCTGTGGCACTATTCTAATGGTTAGTGTCCCATGCAGCAGTTTATCTTTGGTGGTGACTGTCAGATGTGGCCACTGCACCAGCCTCCTATCTGTTAACATGATGAAAGCTTCATTCATCCCTCTGCATCTTCTAGCTTCCCTTAGCCATCTTGAGCCAAGAGAAACTGGGAGTGCGGAAGAAGGTTCAGATAAGATCTTGGACAGCCACCACAATCCTCCTATGATGACCTTCTCTGACTGTGAGGAAGAAGACATAATGCCTATCATAACCAATATTGTCAACAAACCTCCTGAGAAAAGACAAAGAGCTCCATCAGCCTATAACCGCTTCATCAAGGAAGAGATTAGGAGGCTTAAGACTGAAAATCCTGACATGTCACACAAGGAAGCTTTCAGCACTGCTGCCAAAAATTGGGCCAATTTTCCTCCAATTCATTGCAAAGGAGATGAAGAGAGTCTTAACGAGACACAGCAGATTTTGACTTGGCGTTCTCCTACAGCTCAAGAGGCTCATGAAGAAGACCAAGGTCTTCGTGGCAGAAAGGTTCCAAGGAACTCCATTTTGGCAAAGACCCCGTTTGAGTGA 648 0.4491 MSSLNHLFDLSDQICYVQCGFCGTILMVSVPCSSLSLVVTVRCGHCTSLLSVNMMKASFIPLHLLASLSHLEPRETGSAEEGSDKILDSHHNPPMMTFSDCEEEDIMPIITNIVNKPPEKRQRAPSAYNRFIKEEIRRLKTENPDMSHKEAFSTAAKNWANFPPIHCKGDEESLNETQQILTWRSPTAQEAHEEDQGLRGRKVPRNSILAKTPFE* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00757 215 Gene3D High mobility group box domain 112 194 IPR036910 -
Pte11g00757 215 FunFam Axial regulator YABBY 4 110 178 - -
Pte11g00757 215 Pfam YABBY protein 10 167 IPR006780 GO:0007275
Pte11g00757 215 SUPERFAMILY HMG-box 108 163 IPR036910 -
Pte11g00757 215 PANTHER PROTEIN YABBY 6-RELATED 1 175 IPR006780 GO:0007275
Pte11g00757 215 MobiDBLite consensus disorder prediction 184 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00757 Pte-Chr11 8670512 8672386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00757 2 216 C2C2-YABBY Transcription Factor Family AT1G23420 58.222 5.06e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pte11g00757 YABBY 1.1e-63 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00757 K25796 - qsa:O6P43_025277 322.013