Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00745 ATGATTTTGCAATCCTGTTCCTATAGTTTTGATCTATTTCATCCACTTTGTCCATGTCAAAAATCAATAAAAGCCCAGAATTTTTCTGGGTTTGTTTTGTCGAGGAGGAAGAGAAAACGGTTGCTTTCTACTACTGGGCAGACGAATTTTAGAAGGAGATGTAGTTTTAGATTGTGCGCTTTCTCTGGTGATGGTTCTCATCGTAATCTGAATGTAGATATTGCTACTTCTGCTACAAAGGGTGCTAAAAAATTTGTCTTTAACAGGATTTCTAATGAGTTGGAAGGTGATGAAGTGGTCCTAGATTCTAGTAGTCAATTGGGTTCAAATTTTACTAGTTTTCAGGAAGACCCTATTGTTGATAAGTTGAGAACTCAGCTCGGCGTTATACATCCAATTCCATCTCCTCCTATAAATAGGAATATAGTTGGATTGTTTGTACTTTTTTTCTTTGTAGGTGTGGTGTTTGACAAAGTGTGGACCTGGAGGAGAACAGATAAAGTTGGCAGTGATGAGAGGAGGCGTGGCGTGTTGCCTCAGCTTCCAAGTAGTTTCTCTTTGCTTCTGGAGAAGGATTTGCAGAGGAAAGAATCAGTTGAATGGGTTAATATGGTGTTAGGGAAATTGTGGAAAGTTTACAGGGGTGGAATTGAGGATTGGATTGTTGGGTTGCTTCAGCCCGTGATTGATAATTTGAAGAAGCCTGAATACGTGAAGAGGGTTGAGATTAAACAATTCTCGTTAGGGGAGGAGCAATTGTCTGTTAGGAATGTTGAACGCAGAACTTCACGTCGAGTTAATGACTTGCAGTATCAGATAGGCCTAAGATATACTGGAGGTGCACGCATGTTGTTAATGCTTTCATTAAGATTTGGCATTATTCCAATTGTCGTGCCTGTTGGCATTCGTGATTTTGACATTGATGGTGAACTTTGGGTAAAACTACGACTAATACCCACAGAACCTTGGGTAGGCGCTGTTTCGTGGGCTTTTGTTTCACTTCCTAAGATCAAGTTTGAATTATCTCCATTCCGCTTGTTCAATCTAATGGCAATTCCTGTCCTTTCAATGTTTTTGAGGAAACTTCTCACCGAGGATTTGCCTCAATTGTTTGTACGTCCCAAGAAAATTGTCTTGGACTTTCAAAAAGGGAAGGCCGTTGGTCCAGTATCAAATGATTTTAAATCAGGAGAAGCACAAGAGGGAAACAAGGATTTTGTTGGAGAACTATCAGTTACTGTCGTTGATGCTCGAAAGCTTCCTTATCTTTTCTTTGGTAAAACGGATCCATATGTCATTCTAAGCCTCGGGGATCAAATTATACGTAGTAAAAAGAATAGTCAAACAACTGTTTTTGGCCCTCCTGGCAGTCCAATTTGGAACCAGGATTTCCATATGCTTGTTGGGAATCCCAGAAAGCAGAAATTAAACATTCAAGTGAAGGACTCTCTTGGGTTTGCTGATTTCACCGTTGGTGCAGGGGAGGTGGATTTGAGCTCTCTAAAAGATACTGTACCAACAGACAGGATTGTGGTGCTGCGGGGAAGCTTGGGGCTTTTAAGTGGAGGTTATTCAGGAGAGATATTAGTAAGACTTACCTATAAAGCATATGTGGAGGATGAAGAAGATGAAAATGCTGGTATGGCAGTACCTGACGCCGATGCATCAGATGATGAGTCTGACTCTGATGAACCAAATCTAATGAATAAGGAACGCACTGATAATTCAACAGATGATACAGACAAAGAATCCTTCATGGACGTTTTGGCAGCTTTGATAGTGAGTGAAGAATTTCAAGGGATAGTAGCATCTGAAACAGGATATAATAAAATGGACGATATCTCGACTAGAGGGTCCACATTATCAGGATTATCACCTGATTCTCAAGTGCAAACAGTTCCTTCGAGTCCTAATGATGCTGGAATCACTAGAGGATCTGCCTTGTTTTGGCTTGCTCTGATTACTAGTGTATCTGTATTGATTGCTCTCAACATTGGCGGCTCAAGTATATTCAATCCGTAA 2022 0.4055 MILQSCSYSFDLFHPLCPCQKSIKAQNFSGFVLSRRKRKRLLSTTGQTNFRRRCSFRLCAFSGDGSHRNLNVDIATSATKGAKKFVFNRISNELEGDEVVLDSSSQLGSNFTSFQEDPIVDKLRTQLGVIHPIPSPPINRNIVGLFVLFFFVGVVFDKVWTWRRTDKVGSDERRRGVLPQLPSSFSLLLEKDLQRKESVEWVNMVLGKLWKVYRGGIEDWIVGLLQPVIDNLKKPEYVKRVEIKQFSLGEEQLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLRFGIIPIVVPVGIRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLRKLLTEDLPQLFVRPKKIVLDFQKGKAVGPVSNDFKSGEAQEGNKDFVGELSVTVVDARKLPYLFFGKTDPYVILSLGDQIIRSKKNSQTTVFGPPGSPIWNQDFHMLVGNPRKQKLNIQVKDSLGFADFTVGAGEVDLSSLKDTVPTDRIVVLRGSLGLLSGGYSGEILVRLTYKAYVEDEEDENAGMAVPDADASDDESDSDEPNLMNKERTDNSTDDTDKESFMDVLAALIVSEEFQGIVASETGYNKMDDISTRGSTLSGLSPDSQVQTVPSSPNDAGITRGSALFWLALITSVSVLIALNIGGSSIFNP* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00745 673 ProSiteProfiles C2 domain profile. 389 511 IPR000008 -
Pte11g00745 673 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 408 536 IPR035892 -
Pte11g00745 673 MobiDBLite consensus disorder prediction 543 581 - -
Pte11g00745 673 Gene3D C2 domain 392 537 IPR035892 -
Pte11g00745 673 CDD C2 410 504 - -
Pte11g00745 673 MobiDBLite consensus disorder prediction 563 581 - -
Pte11g00745 673 CDD SMP_SF 217 380 - -
Pte11g00745 673 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 41 673 - -
Pte11g00745 673 MobiDBLite consensus disorder prediction 543 562 - -
Pte11g00745 673 MobiDBLite consensus disorder prediction 619 638 - -
Pte11g00745 673 Pfam C2 domain 408 504 IPR000008 -
Pte11g00745 673 SMART C2_3c 409 510 IPR000008 -
Pte11g00745 673 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 195 382 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00745 Pte-Chr11 8549257 8554642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00745 400 501 C2H2 Transcription Factor Family AT4G05330 34.951 2.58e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00745 - - qsa:O6P43_032342 902.894