Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00733 ATGAGGGAAATCAAAGTGCAGAAGCTCGTTCTCAACATTTCTGTTGGTGAGAGTGGTGACCGTCTCACCAGAGCTGCCAAGGTTCTGGAACAATTGAGCGGCCAAACCCCAGTCTTCTCCAAGGCTAGGTACACTGTTAGGTCATTTGGTATCAGGCGTAATGAAAAGATAGCTTGCTACGTTACTGTAAGGGGTGAGAAGGCAATGCAGCTTCTGGAGAGTGGTTTGAAGGTTAAGGAGTATGAATTGCTGAGGAGGAATTTCAGTGAAACTGGCTGCTTTGGGTTTGGTATTCAGGAGCACATTGATTTGGGGATCAAGTATGATCCATCAACGGGTATCTACGGAATGGATTTCTACGTTGTTCTAGAGCGCCCTGGTTACCGTGTTGGTCGTAGAAGAAGGTGCAAGTCCCGTGTTGGAATCCAGCACCGTGTTACCAAAGATGATGCCATGAAGTGGTTTCAAGTTAAGTACGAAGGAGTGATTCTTAACAAGTCACAATCTAACACTGCATAA 519 0.4586 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKDDAMKWFQVKYEGVILNKSQSNTA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00733 172 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 162 IPR002132 GO:0003735|GO:0005840|GO:0006412
Pte11g00733 172 ProSitePatterns Ribosomal protein L5 signature. 29 45 IPR020929 GO:0003735|GO:0005840|GO:0006412
Pte11g00733 172 Pfam Ribosomal protein L5 1 52 IPR031310 -
Pte11g00733 172 FunFam 60S ribosomal protein L11 1 164 - -
Pte11g00733 172 Gene3D - 1 167 IPR022803 -
Pte11g00733 172 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 166 IPR002132 GO:0003735|GO:0005840|GO:0006412
Pte11g00733 172 Pfam ribosomal L5P family C-terminus 56 154 IPR031309 -
Pte11g00733 172 SUPERFAMILY RL5-like 1 163 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00733 Pte-Chr11 8428491 8431451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00733 1 173 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.376 1.98e-122 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00733 K02868 - ming:122065022 321.242