Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00728 AGCACCACGGAATTGCGTGCGCTTGATTGCAACCTTACTTCTCTCTGTGACCATATCCAAATGGATGGCTTCCATGCTGGCTCTTTCTCTGATATCGTCATCCATGCAATGGGCTCCTCTTATCACCTTCATCGCCTTATCATCTCTCGCAGTTCTTACTTCAGAAACATGCTTCACGGCCCTTGGAAAGAAGCAAATTCTCCGATTGTAAACTTGCATATAGATGATAAGAATGTTAATAGTGAAGCAATTGCAGTGGCGTTAGCATATCTGTATGGACACCATCCTAAGCTTAATGACAATAATGCATTTCGCGTTCTGGCCGCTGCCTCATTTCTTGATCTTCAGGACTTATGTGCAATTTGTACAGATTTTATAATCTCAGAGCTCTGGACATCAAACTTTTTAGCATATCAGGTCTTTGCGGAGAGCCAAGATTATGGGATACATGGGGAGCGTGTCCGAAATGCCTGCTGGGGTTATCTCTGCCAAAGTGGCAGCATGGAGTTAAAAGAGGTGGTCCCAAAACTTTCTTCACAGACATGTCATGCACTGTTAACCTCGGATGAACTGTGGGTGCCAGTGAAGAAAAAAGGACCTTCATCATTTAGTAATCCATTGTTGGATATGGTTGGTAGCGGAAGTTCATGTTCCTGTAGTGAGATGCCTGTTGATGCATGTGCAAGTGACCACTGCACCACCAAGATGCCCATGGAAGGGCCATCAGAGGGGGGTTCATGTTGCCATTTGAATAACAATGGTTGGCTGTTGAGGGACCAAAGAAATTGCTTCTCATTAAATTCTTCCTGCAATGGCTTCATGCCAAATGATTGGGGAAGATTGGGCATGCCTCTTATGTCGTGGGGTGGAAGGGTAGTGGGGCGAAGACAGCTTAAAGCTCCTGGTAAGGAAGACTCTGCGGTGACTAGAGAGGAATATGATGCATTTGCTAATATATTTGAAGGGGGTTCTCTTTTGTATTGTAATATGTCTTTTGAGGCACTTTTGAATGTCAGAAAGCGGCTTGAAGAACTAGGTTTCCCTTGCAAGGCTGTAAATGATGGGCTTTGGCTCCAGATGCTCCTAAGCCAGAGGGTACAAGAGATTGCTGCTGATACATGCAAAAGTTGCTGCCTTACTAGTAATGCATGCACTTGTCGCCAGCCAGTTCGATTTGCTCATGGAGTTACTGCTACTAGTTATTACATGCATGAAAACCAGAATATTTCTCCTGGAAACATGTATGTTGCTGAGTCTTCACAAGGTGGAGGAAGTGGTCTTTTTAGACCTGTGAGGGTACATGTTCGAGGGCCCATTGATGGGCTTGCTGGAATTGGACGTGGGGCTACATTTGTGCCAGCCCCTGCTGGACCTCCTACACGCTTTGTATTTTCTCGTGTTCCATTCAGTGTTGGAAACAGAAACTATCCACAGTCTCTTGCTAATGATGATTCAGATGCTCGAACAGATCACAATGGAGATCTAACGGGGGATGGGTTGACAGCCTTGGTTGGGCTTAGTCAAAGTGGAAGCAATAATGCCTCCAGTGTACAAGTAGAGGAGACCGGAAGGGCCTATGAGATGGAGTTGCAAAGCAGAATACCTGGAACTGCAGCAGGAGGGCCAAGCACTGGTGGTATTCCTATCCGTATGCTTGAGTCAACAGAACATACCATAGGGATTGAATGGGAGAATGTCAGCAGTTCTTCCATATCCTTGGATATGAAAACACCTCTAAGTCATTTTCCTCCTTTTCGCTTTGGAGTACAATTTGAGGATGTACACAGGCTTGTTGATGGCCAGGTGAAACACTCTCCAGAAGTTTTCTATGCTGGTTCATTGTGGAAGGTAGTCAGTGTCCAAGCCTTTAATGACGAAGATCCTCAGGGACGCCGAACTCTTGGATTATTTCTTCACCGTCGGAAAGCTGAGATAAATGATTCTCTCAGAAAGGTTCATATGTATATCGATACTCGTGAAAAGGTTACTGCCCGTTATCAGTTGATTTGTCCGTCTAAGAAGGAAGTCATGGTATTTGGAAGTTTTAAACAAACTGGTACTCTTTTACCAAAGGCTCCTAAGGGCTGGGGGTGGCGAACTGCTTTGCTTTTTGAAGAGCTTCCTGATCTCCTCCAAAATGGAGCCTTAAGGGTCGCTTCTGTTGTGCAGCTTGTA 2175 0.4515 STTELRALDCNLTSLCDHIQMDGFHAGSFSDIVIHAMGSSYHLHRLIISRSSYFRNMLHGPWKEANSPIVNLHIDDKNVNSEAIAVALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAESQDYGIHGERVRNACWGYLCQSGSMELKEVVPKLSSQTCHALLTSDELWVPVKKKGPSSFSNPLLDMVGSGSSCSCSEMPVDACASDHCTTKMPMEGPSEGGSCCHLNNNGWLLRDQRNCFSLNSSCNGFMPNDWGRLGMPLMSWGGRVVGRRQLKAPGKEDSAVTREEYDAFANIFEGGSLLYCNMSFEALLNVRKRLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKSCCLTSNACTCRQPVRFAHGVTATSYYMHENQNISPGNMYVAESSQGGGSGLFRPVRVHVRGPIDGLAGIGRGATFVPAPAGPPTRFVFSRVPFSVGNRNYPQSLANDDSDARTDHNGDLTGDGLTALVGLSQSGSNNASSVQVEETGRAYEMELQSRIPGTAAGGPSTGGIPIRMLESTEHTIGIEWENVSSSSISLDMKTPLSHFPPFRFGVQFEDVHRLVDGQVKHSPEVFYAGSLWKVVSVQAFNDEDPQGRRTLGLFLHRRKAEINDSLRKVHMYIDTREKVTARYQLICPSKKEVMVFGSFKQTGTLLPKAPKGWGWRTALLFEELPDLLQNGALRVASVVQLV 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00728 725 Pfam BTB/POZ domain 25 128 IPR000210 GO:0005515
Pte11g00728 725 SMART BTB_4 30 130 IPR000210 GO:0005515
Pte11g00728 725 ProSiteProfiles BTB domain profile. 30 100 IPR000210 GO:0005515
Pte11g00728 725 SUPERFAMILY POZ domain 25 128 IPR011333 -
Pte11g00728 725 Gene3D Potassium Channel Kv1.1; Chain A 5 164 IPR011333 -
Pte11g00728 725 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 2 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00728 Pte-Chr11 8320243 8325955 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte11g00728 BTB 3.8e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00728 - - qsa:O6P43_003564 824.313