Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00707 ATGTATGCGGCAACACAGCAAAACGCAATACGTCAAAATCACCAGCAGCAACAGCACCATCACCAGCAGCTACAAAAACAGCAATCTCTAGCTGCATCTGCAACACAACCGACTTCTACATCGTCGTCTTCTGCTCAAGAAGAAGCTTTGAAAAGAAATACAGATTGCGTTTACTTTCTGGCATCTCCCCTGACATGCAAAAAGGGAAGTGATTGTGAGTACCGCCATAGTGATTTTGCTCGGGTTAATCCTAGGGATTGTTGGTTCTGGTTGAATGGGAATTGCTTGAATCCCAAATGCGGTTTTAGACATCCACCTCTTGATGGACTGTTAGGTGGTCAAGCTGCAACTGTTTCTGGACCTCCTGTGCCTCCTTCGCAGAAGATAAGAACTCCAGGAATCCATGCATCATATGGTCCAAAACCGGTGCCTTGCGTGTTTTTCCAGCAGGGGCAATGTTTGAAAGGCGACATGTGTTTATTCTTGCATGGTCCCAACCCAACAACCAGTAGTAAAGCTCCTCAAGTTCAGGGAACTAAGCAATGCTCTGACCCTCCTAAGCTTACAAAAGCTTTTGGTAGCCTCGAAAAATGTATTCAAGAGAAGAGGATTCCTCAAGCAAATGTGAATAAGTCACTCACGGATGGTTATGTAGCTAAACCAGTGCGGAAAGTAGGAACCACTGCAAAAACAAATTCATCTTCCAATAGTATCGTGCCTCCACCTACAAGTTTCAACTTTGACGCTTCTAGATCAAAGGCAACAACCATTTCACCCACTGCCAATGGTATCTCTTCTGGTCGGTATCCGTTCCATGCATCAGATGACCATAATTTACAGAATGGGAAAGACAGTGAAGAATTTCTTAGAGAATCCTCTCCTGGGTTTGATGTTCTGGTGGATGATGATCTCAGAGCTTCTGATGATTACTACCATGATGAAGATCACTTTGGAAGAGAAGATAACTTGGGTTCTATGGCTGAATATGATGGACAGTCTGCCGATTACAATTCGTTGAATGATGGCCAGGGAAGATTTCACGACTCACAAACTTATACTTCGTATGATCACTTGCAGGAGCCATATCACCAGAATATGACTTCGTCAGAGAGAATTAAAGGGGGGCCAGATCACTTGGAAAGAAGAGGTTATGGGAAAGCTAGTAGTCCCGAGAACACATTGTCTGATCTCCGGTACCGACTGTCTAAGCAAAGGAGAGTAGAAGGTTTGAGGTCAGTCGTAAGCCGCAATGTTCCCCTGGATGATCACTATGATGAGAGAAGTTTCAGGTCATCATCAAGAAAGGTTTTGACTAGGCAACCCCTGAACGAGAGCTCACTCAGTAATCGCCTCAGAGGTAGAATAAAGCTCGCAGAAGGGTCTCAGGTCTCCTCTTACCAGGGAAGGCTTCAAGATAGAAAAAAGGGAAGGGGGTCAATGGATGATGCTGATGGAAAAAACTTGAGGATTCGACAGATGAGGAGAGATGTGAATGATGGGAGCTCTGGTTTTGCAGGTCCAAAAAGTCTTGCAGAACTGAAAGCTGTTAAAACTACTGAGAATAAGGAGCAATATTTACTGCGGAAGAGAAAGTTTGAGAATGACCACATATCCAATGATATTTCTTTTGAGAGTCCAAAACCTCTCAGTGAAATTCTCAAGGAAAAACGAGGAGCTGCTGCTGCTTATGGAACTATCAGTTCATCTAATAATAATAAAAACAATAACACCTATGAAATCGGAGAAACTAAGACAAGTGGCTTGAATAATAGAGCTGCTGTAGGAACTCACAGCAGTCTTCCCCCTCTGGGCAAGGATGATCCCAGTGAAAATGCATCTGAAGGCGTAGACAAATCCAATTTAATTCATGGTCTGTCATCTGAAGAACCTCTTGCAAATGAGTATGAAGCTGAAGAGGGAATGATTAATGATGAAACGCTGGAGGGCCAGGAGAATGAAGGTGATGAACCAAGGGACGAGGAGTATCAGTATGATCATCCAGTTTATGGAAAAGATTATGGTTTTGATGCAGATGTGCATATAGACCTGGAAGAAGAATACCTGGATGAAGAAGATGGGGATGACTTTGCTAAGAAGATTGGTGCTGTGCTTTCATGA 2118 0.4348 MYAATQQNAIRQNHQQQQHHHQQLQKQQSLAASATQPTSTSSSSAQEEALKRNTDCVYFLASPLTCKKGSDCEYRHSDFARVNPRDCWFWLNGNCLNPKCGFRHPPLDGLLGGQAATVSGPPVPPSQKIRTPGIHASYGPKPVPCVFFQQGQCLKGDMCLFLHGPNPTTSSKAPQVQGTKQCSDPPKLTKAFGSLEKCIQEKRIPQANVNKSLTDGYVAKPVRKVGTTAKTNSSSNSIVPPPTSFNFDASRSKATTISPTANGISSGRYPFHASDDHNLQNGKDSEEFLRESSPGFDVLVDDDLRASDDYYHDEDHFGREDNLGSMAEYDGQSADYNSLNDGQGRFHDSQTYTSYDHLQEPYHQNMTSSERIKGGPDHLERRGYGKASSPENTLSDLRYRLSKQRRVEGLRSVVSRNVPLDDHYDERSFRSSSRKVLTRQPLNESSLSNRLRGRIKLAEGSQVSSYQGRLQDRKKGRGSMDDADGKNLRIRQMRRDVNDGSSGFAGPKSLAELKAVKTTENKEQYLLRKRKFENDHISNDISFESPKPLSEILKEKRGAAAAYGTISSSNNNKNNNTYEIGETKTSGLNNRAAVGTHSSLPPLGKDDPSENASEGVDKSNLIHGLSSEEPLANEYEAEEGMINDETLEGQENEGDEPRDEEYQYDHPVYGKDYGFDADVHIDLEEEYLDEEDGDDFAKKIGAVLS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00707 705 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 47 703 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 1 47 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 632 658 - -
Pte11g00707 705 SMART c3hfinal6 51 78 IPR000571 GO:0046872
Pte11g00707 705 SMART c3hfinal6 139 165 IPR000571 GO:0046872
Pte11g00707 705 SMART c3hfinal6 83 106 IPR000571 GO:0046872
Pte11g00707 705 Pfam RNA-binding, Nab2-type zinc finger 144 164 - -
Pte11g00707 705 Gene3D - 40 107 - -
Pte11g00707 705 Gene3D - 135 190 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 424 487 - -
Pte11g00707 705 ProSiteProfiles Zinc finger C3H1-type profile. 50 79 IPR000571 GO:0046872
Pte11g00707 705 ProSiteProfiles Zinc finger C3H1-type profile. 81 107 IPR000571 GO:0046872
Pte11g00707 705 MobiDBLite consensus disorder prediction 331 349 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 366 398 - -
Pte11g00707 705 FunFam Zinc finger CCCH domain-containing protein 17 44 107 - -
Pte11g00707 705 SUPERFAMILY CCCH zinc finger 141 164 IPR036855 GO:0046872
Pte11g00707 705 MobiDBLite consensus disorder prediction 271 294 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 228 249 - -
Pte11g00707 705 ProSiteProfiles Zinc finger C3H1-type profile. 139 166 IPR000571 GO:0046872
Pte11g00707 705 MobiDBLite consensus disorder prediction 564 596 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 470 487 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 277 294 - -
Pte11g00707 705 Pfam Zinc-finger containing family 51 105 IPR041686 -
Pte11g00707 705 MobiDBLite consensus disorder prediction 434 450 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 564 671 - -
Pte11g00707 705 MobiDBLite consensus disorder prediction 312 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00707 Pte-Chr11 7653930 7657592 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte11g00707 zf-CCCH_3 9.1e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00707 - - qsa:O6P43_032347 619.772