Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00691 ATGTCCGCAGGAAACTCTACCATCTTCAGTTTTTTTAGAATTGTTCTCTCTGAATCTCTCACGCTTCCAAAAGTTTTTGTACGTAAATATGGACATCGTTTATCCATTCCAATATGTCTTAAGCTTGAAAATGGTGATGAGTGGAAACTATACTGGACAAAACGTGATGGTGTTATATGGTTTGAAGAGAATGGTTGGAAAAAATTTGCTGAACATTATGCAATTTCGATCGGTCATTTCTTAGTGTTTGATTATGAAGGACACTCCAGTTTTGTTGTTTATGTGTATGACAAGAGTACTGCAGAAATACATTACCCTATGAAACGCTCTTCAGATGAAGAAAACAACAGTGAGGATAGTACTGAGGATTCGATTGAGATATTGCATGAGTTACCATCATGCCAGAAACGAAAGAAACGAAAATCACAAATCCCAGGTCGTCATCGTCAACCTTCTGAAAGAGCGAAGCCTCAAAGAAAATTAGTGAAGGAAAATAATAAAGCTTTGCAAAAAGCTAATGCTTTTAGGTCTGAAAATCCATTTTTCAGGGTTGTCATGACAGCTTCCTACGTCAGCAAGCGTGCAACTCATGTGAATATACCTCAAGAATTTTCTTCGAAGTTCTTGAAAGACAGGGACGGAGTCACGATCATGGAGACAAATGATGAAAGAACATGGGCGATGACATGTAACTCGTACCCCAACAGAGGTGTAACGAGAAAGGCATTCTGCTCCGGATGGAAATCATTTGCAAAAGACAACCATCTGCAAGTCGGTGACCATGTGCCATTGAGATTTGCCATGAGATGTTTCACAGCTAAGCATGGTTCAGTAACCCTCAAACTTAATCGGGCACATTGGTCCGTTGAGTACAGGATAAAGAGGGTTGGTACCCGCAAAGTGGCCGAATTCGGTAGAGGATGGAAAGAATTTTCAAGAGACAACAATTTGGCTATGGGTGATGTCTGCATCTTTGAGCTGGTTGATGTGAACAAATTGATTTTGCTAGTTGACATTGTACGAGCTGCTCGAAATCCTTATCGTCTTTCTTCTAAAGTTCATACTACTCAAGTACCAGACTTTGTTGGTGGATCTTTGAAGTGCGAAGCTGAAAGTGACAGAGAGTGA 1128 0.4025 MSAGNSTIFSFFRIVLSESLTLPKVFVRKYGHRLSIPICLKLENGDEWKLYWTKRDGVIWFEENGWKKFAEHYAISIGHFLVFDYEGHSSFVVYVYDKSTAEIHYPMKRSSDEENNSEDSTEDSIEILHELPSCQKRKKRKSQIPGRHRQPSERAKPQRKLVKENNKALQKANAFRSENPFFRVVMTASYVSKRATHVNIPQEFSSKFLKDRDGVTIMETNDERTWAMTCNSYPNRGVTRKAFCSGWKSFAKDNHLQVGDHVPLRFAMRCFTAKHGSVTLKLNRAHWSVEYRIKRVGTRKVAEFGRGWKEFSRDNNLAMGDVCIFELVDVNKLILLVDIVRAARNPYRLSSKVHTTQVPDFVGGSLKCEAESDRE* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00691 375 Gene3D - 4 101 IPR015300 -
Pte11g00691 375 CDD B3_DNA 262 331 IPR003340 GO:0003677
Pte11g00691 375 Gene3D - 262 344 IPR015300 -
Pte11g00691 375 Gene3D - 161 261 IPR015300 -
Pte11g00691 375 ProSiteProfiles B3 DNA-binding domain profile. 287 343 IPR003340 GO:0003677
Pte11g00691 375 SMART B3_2 11 99 IPR003340 GO:0003677
Pte11g00691 375 SMART B3_2 182 343 IPR003340 GO:0003677
Pte11g00691 375 ProSiteProfiles B3 DNA-binding domain profile. 183 286 IPR003340 GO:0003677
Pte11g00691 375 MobiDBLite consensus disorder prediction 135 167 - -
Pte11g00691 375 SUPERFAMILY DNA-binding pseudobarrel domain 177 261 IPR015300 -
Pte11g00691 375 ProSiteProfiles B3 DNA-binding domain profile. 5 99 IPR003340 GO:0003677
Pte11g00691 375 MobiDBLite consensus disorder prediction 146 166 - -
Pte11g00691 375 CDD B3_DNA 180 262 IPR003340 GO:0003677
Pte11g00691 375 SUPERFAMILY DNA-binding pseudobarrel domain 6 99 IPR015300 -
Pte11g00691 375 PANTHER B3 DOMAIN-CONTAINING 287 331 - -
Pte11g00691 375 Pfam B3 DNA binding domain 262 342 IPR003340 GO:0003677
Pte11g00691 375 Pfam B3 DNA binding domain 18 98 IPR003340 GO:0003677
Pte11g00691 375 CDD B3_DNA 11 97 IPR003340 GO:0003677
Pte11g00691 375 SUPERFAMILY DNA-binding pseudobarrel domain 261 341 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00691 Pte-Chr11 7502042 7504171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00691 11 341 B3 DNA Binding Superfamily AT3G18990 26.479 1.30e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte11g00691 B3 1.1e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00691 - - ghi:107945491 174.481