Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00685 ATGGAGAGCAAATCAGTTCAGTATCCTGGTCATGTAGCTGCACTTATCATCTTCATGGTGTCTATGCTATTACTTCCTATAACCGAAGAAGCTGGAATGACTACTTCCGTCCAGACTGATGCACAAGCACTTCTCATGTTCAAAAAGATGATTCACCAGGACCCCAATGATGTTCTATCTGGATGGCAACTTGACAAGCATCCATGCAGTTGGTATGGTGTTTCATGCTCTCTAGGACGTATAACACAGCTTGATCTTAGTGGAGGCTACCTTGTTGGGACTGTATCCCTTGACCCTTTTGCTTCCTTGGACATGTTATCTGTTCTTAAGTTATCTGTCAACTCCTTGTCTGTAAATTCCACTAGTTTGCTGCAACTCCCGTTTAGCTTGACCCAGCTTGATCTGTCTTTCACTGGACTTGTAGGTCTTGTCCCTGATAAGCTTTTCTCAAAGTGTCCTACTCTTGTTTCGGTAAACCTTGCTTACAACAACTTGACAGGTTCTGTACCAGAAAATTTCTTGTACAATTCAGATAAACTACAGGCCCTTGATCTTTCTTTTAACAATTTGACTGGCTCGCTTTCTGGTTTGAAGACAGACTCTTGCAATTCACTGGAGCAACTTGACTTGTCCGGAAACCGTTTATCAGATTCTATCCCCACTTCCATTTCAAACTGCGCTAGCTTGAAAACTTTGAGTTTAGCCTCCAATATGATGACAGGGGAAATCCCAAAATCTTTGGGCCAGCTAACTAGCTTGCAGAAATTGGACATATCTAGGAACCAACTCAATGGCTGGATCCCTTCGGAGCTAGGAAATGCATGTGGTTCGCTTTTAGAGCTTAAGCTCTCACAGAACAACATTTCTGGCTCAATTCCTTCTGCTTTCTCCTCTTGCTCATGGCTGCAAATCCTTGATCTTTCCAACAACAACATATCAGGTCCATTGCCTGATTCCATATTTCAAAACCTATCATCACTGGAGGAATTGGTGTTGAGTAACAATGTGATCTCTGGGGAGTTCCCTGCATCCATATCATTCTGTAAGAAATTGAGGAAAGTGGACTTAAGTTCAAATAGGATTTCAGGTATCATTCCCTCTCATATTTGTCCAGGGGCGTCATCACTTGAAGAACTGAGGATGGCAGATAATCTCATTGCAGGAGAAATCCCAGCTGAACTATCAAAATGTTCTCAGTTGAAGACAATAGATTTCAGCCTCAACTATCTCAATGGTACAATCCCACCAGAGCTTGGAATTTTAGAAAATCTTGAGCAGCTAATAGCATGGTTTAATGGCTTAGAAGGGAAGATTCCACGTGAATTAGGCAAGTGCAAGAGTCTAAAAGACCTAATTCTCAATAACAATAAATTGAGTGGTAGCATCCCAACAGAGTTGTTCAATTGCAGTAATCTTGAATGGATATCACTCACAAGTAACCAGCTCATTGGTGAAATCCCAAGGGAATTCGGTCGTTTGACGAGACTGGCAGTCCTGCAGCTAGGGAACAACAACTTGACAGGGGAGATACCATCAGAAATAGCAAATTGCAGCAGTTTGGTATGGTTGGACTTGAACAGCAACAAGCTTTCTGGGGAGATCCCTCCACGAATTGGAAGACAGCAAGGAGCAAAAGCTTTGAGTGGAATTCTGTCAGGTAACACATTGGTGTTTGTACGTAATGTGGGGAATTCATGCAAAGGAGTTGGCGGCTTATTGGAATTTTCGGGAATCCGACCTGAAAGACTATTGCAGGTACCATCACTGAAAACCTGCGATTTCACAAGAATGTATTCTGGTCCAGTTTTGAGTCTGTTTACACAGTACCAAACTTTGGAGTATCTTGACCTTTCATACAATGAGCTAAGTGGAAACATCCCTGATGAATTTGGTGACATGATTGCTTTACAAGTCCTTGAATTGTCTCACAATCAATTCTCTGGAGATATACCTTCGTCACTTGGCCAGCTTAAAAATCTAGGTGTGTTTGATGCTTCACACAACAGATTGAAAGGTCAAATCCCAGATTCATTTTCAAACTTATCATTCTTGGTACAAATTGATCTTTCATTTAATGAATTAACTGGGCAAATTCCACCAAGAGGACAGTTGAGTACACTGCCAGCAAGCCAGTATGCAAATAATTCAGGGCTTTGTGGGGTCCCTTTGCTTGAATGTCAAAACAACCCACTGGCAACGAATCCTAGTGATGATGGCGGCAACAGAGAAGGCAACAGGTCAGGATCAGCATCTTGGGCTAGCAGCATCATCTTGGGAATTCTTATATCCATTGCTTCTGTTTGTGTATTGGTAGTATGGGCAATTGCAATGAGCGCACGGCGGAAGGAGGCACAGGAAGTCAAGATGCTTAACAGCTTGCAGGCAATTCATGCACCGACCACATGGAAGATTGACAAGGAGAAAGAACCTTTGAGCATTAATGTGGCAACATTTCAGAGACAGCTAAGGAAGCTAAAGTTCTCACAGCTCATTGAGGCAACAAATGGTTTCTCTGCTGCAAGTCTTATAGGTTCTGGAGGGTTTGGAGAAGTATTCAAGGCAAATCTGAAGGATGGATCGAGTGTTGCAATCAAGAAGCTTATCCGACTGAGCTGCCAAGGCGATCGGGAATTCATGGCTGAGATGGAAACCTTAGGCAAGATCAAGCATAGGAATCTTGTACCTCTACTGGGATACTGTAAAGTTGGTGAAGAGAGGTTGCTTGTGTATGAATTCATGGAATATGGAAGCTTAGAAGAAATGCTGCATTGTAGAACAAAAGCACAAGACAGGATTTTAACATGGGATGAAAGGAAAAAAATTGCCAGAGGCGCTGCAAAAGGGCTGTGCTTCCTGCACCATAATTGCATACCACATATTATTCACCGTGACATGAAATCAAGCAATGTGCTACTTGATCATGAGATGGAAGCAAGAGTTTCTGATTTTGGAATGGCAAGACTCATAAGTGCACTTGATACCCATCTCAGTGTAAGCACATTGGCAGGAACACCAGGATACGTCCCACCAGAGTATTACCAAAGTTTCAGGTGCACTGCTAAAGGAGATGTTTATTCATTTGGGGTTGTCATGTTGGAACTCCTAACAGGTAAGCGCCCCACAGATAAAGAGGATTTTGGTGATACCAACTTGGTGGGGTGGGCAAAAATGAAGGTACGTGAAGGGAAACAGATGGAAGTGATAGATGCAGAGTTACTTTCAGTGACTAAAGTAACAGATGAAGCTGAAGCAGTAGAAGTGAAAGAGATGATAAGATACCTCGAGATTACAATGCGTTGTGTCGATGACTTCCCTTCCAAAAGGCCAAGCATGTTGCAGGTAGTAGCTATGTTGAGAGAGCTGATGCCTGGATCAGCTGAAGGAAGTAGCAATAGTGCTTGA 3402 0.4268 MESKSVQYPGHVAALIIFMVSMLLLPITEEAGMTTSVQTDAQALLMFKKMIHQDPNDVLSGWQLDKHPCSWYGVSCSLGRITQLDLSGGYLVGTVSLDPFASLDMLSVLKLSVNSLSVNSTSLLQLPFSLTQLDLSFTGLVGLVPDKLFSKCPTLVSVNLAYNNLTGSVPENFLYNSDKLQALDLSFNNLTGSLSGLKTDSCNSLEQLDLSGNRLSDSIPTSISNCASLKTLSLASNMMTGEIPKSLGQLTSLQKLDISRNQLNGWIPSELGNACGSLLELKLSQNNISGSIPSAFSSCSWLQILDLSNNNISGPLPDSIFQNLSSLEELVLSNNVISGEFPASISFCKKLRKVDLSSNRISGIIPSHICPGASSLEELRMADNLIAGEIPAELSKCSQLKTIDFSLNYLNGTIPPELGILENLEQLIAWFNGLEGKIPRELGKCKSLKDLILNNNKLSGSIPTELFNCSNLEWISLTSNQLIGEIPREFGRLTRLAVLQLGNNNLTGEIPSEIANCSSLVWLDLNSNKLSGEIPPRIGRQQGAKALSGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPSLKTCDFTRMYSGPVLSLFTQYQTLEYLDLSYNELSGNIPDEFGDMIALQVLELSHNQFSGDIPSSLGQLKNLGVFDASHNRLKGQIPDSFSNLSFLVQIDLSFNELTGQIPPRGQLSTLPASQYANNSGLCGVPLLECQNNPLATNPSDDGGNREGNRSGSASWASSIILGILISIASVCVLVVWAIAMSARRKEAQEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGSGGFGEVFKANLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEFMEYGSLEEMLHCRTKAQDRILTWDERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDAELLSVTKVTDEAEAVEVKEMIRYLEITMRCVDDFPSKRPSMLQVVAMLRELMPGSAEGSSNSA* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00685 1133 PRINTS Leucine-rich repeat signature 250 263 - -
Pte11g00685 1133 PRINTS Leucine-rich repeat signature 180 193 - -
Pte11g00685 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 172 371 - -
Pte11g00685 1133 SUPERFAMILY RNI-like 219 536 - -
Pte11g00685 1133 Gene3D Ribonuclease Inhibitor 176 726 IPR032675 -
Pte11g00685 1133 SMART LRR_typ_2 250 274 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 302 323 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 324 348 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 275 298 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 493 517 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 633 657 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 202 226 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 518 541 IPR003591 -
Pte11g00685 1133 SMART LRR_typ_2 445 469 IPR003591 -
Pte11g00685 1133 Gene3D Ribonuclease Inhibitor 39 150 IPR032675 -
Pte11g00685 1133 ProSiteProfiles Protein kinase domain profile. 837 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00685 1133 CDD STKc_IRAK 843 1121 - -
Pte11g00685 1133 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Pte11g00685 1133 Pfam Leucine rich repeat 316 361 IPR001611 GO:0005515
Pte11g00685 1133 Pfam Leucine rich repeat 605 646 IPR001611 GO:0005515
Pte11g00685 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Pte11g00685 1133 SUPERFAMILY L domain-like 575 724 - -
Pte11g00685 1133 Pfam Leucine Rich repeat 298 314 IPR001611 GO:0005515
Pte11g00685 1133 FunFam serine/threonine-protein kinase BRI1-like 2 798 912 - -
Pte11g00685 1133 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 430 1120 - -
Pte11g00685 1133 FunFam serine/threonine-protein kinase BRI1-like 2 39 150 - -
Pte11g00685 1133 ProSitePatterns Protein kinases ATP-binding region signature. 843 866 IPR017441 GO:0005524
Pte11g00685 1133 Gene3D Phosphorylase Kinase; domain 1 798 912 - -
Pte11g00685 1133 SUPERFAMILY L domain-like 38 314 - -
Pte11g00685 1133 Pfam Protein kinase domain 840 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00685 1133 FunFam serine/threonine-protein kinase BRI1-like 2 913 1129 - -
Pte11g00685 1133 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Pte11g00685 1133 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Pte11g00685 1133 Pfam Brassinosteroid receptor island domain 548 606 IPR045381 -
Pte11g00685 1133 SMART serkin_6 837 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00685 1133 SMART LRR_sd22_2 657 683 - -
Pte11g00685 1133 SMART LRR_sd22_2 299 326 - -
Pte11g00685 1133 SMART LRR_sd22_2 177 199 - -
Pte11g00685 1133 SMART LRR_sd22_2 202 228 - -
Pte11g00685 1133 SUPERFAMILY Protein kinase-like (PK-like) 818 1118 IPR011009 -
Pte11g00685 1133 Gene3D Transferase(Phosphotransferase) domain 1 913 1130 - -
Pte11g00685 1133 Gene3D - 551 607 - -
Pte11g00685 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 572 730 - -
Pte11g00685 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 372 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00685 Pte-Chr11 7460175 7463576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00685 15 1130 Receptor kinase-like Gene Family AT1G55610 48.312 0.0 1012
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte11g00685 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00685 - - qsa:O6P43_026060 1789.24