Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00683 ATGGAGGATGACGCACTAAATATTCGCAATTGGGGCTATTATGAACCCTCCTTCAAGGGGCACCTCGGTCTGCAACTCATGTCGAGTATGACAGATCATGATACAAAGCCATATTTATCTGGGCGTGATCCTAATAGTATACTAGTGAATCCAAATGGAGCTTTCCATCCTCGCAACTATGTTGTTGCAGAAGCGCCAATTCCTATGAATTATATGCGAGAAAGTTGGGTAAACCAGAGGGATAAGTTTCTAAATATGCTGCCGACAAATTCTGGGTTCTCTGTTCTGCCTGAAACATCAGGAGTTCAGTCCTTGCAGAATATTCAGCAGTCTGATATATCAACGGATGAAAGAGTTGATAGAACTGAAGAACCAGCTATTAAGAAGGAAGGTGGCTCACAAAGGAGAAGACAGGTGAACAATGCTCCAAAAGCTCCGAAAGTGAGGAAACCTCGGAAGCCAAAGGCTAATGCCAATTCTTCTGTTCAGCGAGTGAAACCACCTAAGAGGACTATGGAGATAGTTATAAATGGGATGGACATGGACATGGCAGGCATGCCAATTCCTGTTTGCTCCTGCACTGGAACTCCTCAGCAGTGTTATCGATGGGGATGTGGTGGTTGGCAATCAGCTTGTTGCACAACCAATGTGTCTGTGTATCCACTACCTATGAGCACCAAAAGAAGAGGTGCGAGAATTGCTGGACGGAAAATGAGTCAAGGTGCTTTTAAGAAGGTACTTGAGAAACTTGCATCAGGAGGGTATAATTTTGCCGAACCCATTGATCTAAAGACCCATTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGGTAG 840 0.4452 MEDDALNIRNWGYYEPSFKGHLGLQLMSSMTDHDTKPYLSGRDPNSILVNPNGAFHPRNYVVAEAPIPMNYMRESWVNQRDKFLNMLPTNSGFSVLPETSGVQSLQNIQQSDISTDERVDRTEEPAIKKEGGSQRRRQVNNAPKAPKVRKPRKPKANANSSVQRVKPPKRTMEIVINGMDMDMAGMPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASGGYNFAEPIDLKTHWARHGTNKFVTIR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00683 279 PANTHER - 1 279 IPR010409 -
Pte11g00683 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Pte11g00683 279 SMART GAGA_bind_2 1 279 IPR010409 -
Pte11g00683 279 MobiDBLite consensus disorder prediction 114 135 - -
Pte11g00683 279 MobiDBLite consensus disorder prediction 104 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00683 Pte-Chr11 7436840 7438610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00683 1 280 BBR or BPC Transcription factor family AT2G01930 55.705 3.69e-106 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte11g00683 GAGA_bind 4.7e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00683 - - qsu:111986496 449.129