Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00677 ATGAGTGTGAAGATGCAGCAGCTAGGCCATCATTCTGTGCCTGTGAGATTGAATGAGCAAGTGGGTACCAAAAGGGGATACACTTTTATTCAGGCAAATAGGGCTTGGATACCGAAATTTCTGGTACTGTGGATTATGGTTATGGCATTGTTAAGCATGCTAATCTACAACAAGATGGATGCTGATAACAAAGTGAGGAGGAAAGAGGTTCTGAGTAGTTTGTGTGATCAAAGGGCAAGGATGTTGCAAGATCAATTCAGTGTCAGTGTTAACCATGTGCATGCTTTGGCTGTCCTTGTCTCAACCTTCCATTACTACAGAAAACCATCTGCCATAGATCAGGAGACATTTGCGGAGTATACGGCCCGAACAGCTTTTGAGCGGCCATTGCTGAGTGGGGTAGCATATGCACAGAGAGTTGTTGAGTCAGATAGAGAAGTCTTTGAAAGACAACATGGATGGACAATAAAGACTATGGAAGAAAGAGAGCCGTCCCCAGTTCGAGACGAGTATGCACCTGTGATTTTCTCTCAGGAAACTGTTTCTTATCTTGAATCTCTTGATATGATGTCGGGGGAGGAGGACAGAGAAAACATCTTGAGGGCTAGAGCTACTGGCAAAGCCGTTTTGACAAGTCCTTTTAGGTTGCTGGGTTCTCATCATCTTGGGGTCGTCTTGACTTTCCCTGTTTACAAATCTAAGCTTCCTGCCAACCCATCAGTTAATGAACGCATCGAAGCAACTGCTGGATACCTTGGAGGATCCTTTGATGTTGAGTCCCTTGTGGAGAATTTACTTGGGCAACTAGCAGGGCATCAAGCAATTTTGGTACATGTATATGACATCACAAATTATTCTGATCCCCTGATCATGTATGGTGACCAATTCGACGAAGGTGATGCGTCCCTTTTGCATGAAAGCAAACTTGACTTTGGAGATCCATTCAGGAAACACAAGATGATATGCAGGTATCATGAAAAAGCGCCAACATCATGGACAGCCCTAACAACGGCTTTCCTGTTTTTTGTAATTGGTTTATTAGTGGGCTACATTCTATATGGTGCTGCAATTCACATTGTAAAAGTCGAGGATGACTTTCACGAAATGCAGGAGTTAAAAGTCCGAGCTGAAGCAGCTGATGTTGCTAAATCCCAGTTCCTTGCCACCGTTTCTCATGAAATAAGAACACCCATGAACGGCATACTTGGAATGCTTGCTTTGCTTCTAGATACTGATTTAAGTTCAACTCAAAGGGACTATGCTCAGACTGCTCAAGCATGTGGAAAGGCATTGATAGCCTTAATCAATGAAGTGCTTGACCGAGCAAAAATTGAAGCTGGGAAATTGGAGTTGGAAGCAGTTCCGTTTGACCTTCGTTCCATACTTGATGATGTTCTCTCGTTGTTTTCTGAGAAGTCCAGAAATAAGGGTTTAGAGTTAGCGGTGTTCGTTTCTGATAAAGTTCCAGATATTGTCATGGGGGATCCTGGAAGATTTAGACAAATAGTCACAAATCTTGTGGGAAATTCTGTTAAATTCACAGATCGAGGACACATATTTGTTAAGGTTCATGTGGCTGAAAGCGCAAAGCCTATTACGAATGGGGAATCTGAGATCTTTTGCAATGGAGGGTCAGATGAAATGAGGCTTCCATCTGGTGGTAGTCGTTTTAGTACTTTAAGTGGGTGTGAAGCAGCTGATGAAAGGAACAACTGGGATAATTTCAAACAATTGATTGCCGATGACGAATCTCACTATGATTCTACAAATAAAATCACTGTCAATGGTGGAACTTCTGACAACGTTACCTTAATAGTGTGTGTGGAAGACACGGGGATTGGGATTCCTTTAAATGCACAAGAAAGAGTTTTCATGCCTTTCATGCAGGCAGATAGCTCAACCTCAAGAAATTATGGGGGAACTGGTATTGGCTTGAGTATCAGCAAGTGTTTGGTTGAACTAATGGGTGGTCAGATTAGCTTTATTAGCCGACCGCAAGTGGGGAGTACATTCTCATTCACAGCAGCTTTTCGGAGGTTTAGGAAAATTCCATATAATGACATGAAGAAACCAAAATCTGAAGATCTGCCTTCTAGTTTTAGAGGATTGAAAGCTGTAGTAGTTGACGGAAAACCTGTGAGAGCAGCTGTCACAAGATATCATCTAAAGCGACTAGGAATTATGGTTGAACCAGTAAACAGCATCAAGAAAGCAGTTCCAATGTGTGGAAAAATCAGCCCTATGACTAATGTAAGTACGTTCCATCCTGATATTATCTTCATAGAGAAGGATTCGTGGATAACTGGTGATGATGGGAATTTCAACATACAGCTATTGGATTGCAGACTGAATGGTCATGCATTTAAGTTGCCGAAGATGATCCTTCTTGCGACTAATATCAATAACACTGAATTTGACAAAGCTAAAGCTGCAGGATTTGCTGATACTATAATCATGAAACCATTAAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAAGTGTTGGGAGTAGGGAAGAAGAGGCAGCAATGGAAAGATATGCCAAATGGATCCACTTCTCTGCAAAGTATTCTATGTGGAAAGAAAATTTTGGTGGTCGACGATAATAGAGTAAATCGCAGAGTTGCTGCAGGTGCATTGAAGAAATTTGGAGCTGAGGTAGAGTGCGCTGAGAGTGGCAAGGCAGCACTTTCTATGCTTAAGCTACCTCATGATTTCCATGCGTGCTTCATGGATATTCAAATGCCTGAAATGGATGGGTTTGAAGCAACACGTCAAATCCGTCTCATGGAGCATGAGGCAAATGCGCAGATGAATGGTGAATCTACTTTTGAAGGAACCTGCGACAATAATAGGAGTTGGCATATGCCCATATTAGCTATGACAGCAGATGTAATTCATGCCACATACGATAAATGCCTGGAGGTAGGAATGGATGGTTATGTCTCAAAACCCTTTGAGGAAGAAAATCTTTACCAGGCTGTTGCAAAGTTCTTCAAATCCAAACACAATGGGGAGTCCTAG 3024 0.4223 MSVKMQQLGHHSVPVRLNEQVGTKRGYTFIQANRAWIPKFLVLWIMVMALLSMLIYNKMDADNKVRRKEVLSSLCDQRARMLQDQFSVSVNHVHALAVLVSTFHYYRKPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVESDREVFERQHGWTIKTMEEREPSPVRDEYAPVIFSQETVSYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPANPSVNERIEATAGYLGGSFDVESLVENLLGQLAGHQAILVHVYDITNYSDPLIMYGDQFDEGDASLLHESKLDFGDPFRKHKMICRYHEKAPTSWTALTTAFLFFVIGLLVGYILYGAAIHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRNKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTDRGHIFVKVHVAESAKPITNGESEIFCNGGSDEMRLPSGGSRFSTLSGCEAADERNNWDNFKQLIADDESHYDSTNKITVNGGTSDNVTLIVCVEDTGIGIPLNAQERVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMGGQISFISRPQVGSTFSFTAAFRRFRKIPYNDMKKPKSEDLPSSFRGLKAVVVDGKPVRAAVTRYHLKRLGIMVEPVNSIKKAVPMCGKISPMTNVSTFHPDIIFIEKDSWITGDDGNFNIQLLDCRLNGHAFKLPKMILLATNINNTEFDKAKAAGFADTIIMKPLRASMVAACLQQVLGVGKKRQQWKDMPNGSTSLQSILCGKKILVVDDNRVNRRVAAGALKKFGAEVECAESGKAALSMLKLPHDFHACFMDIQMPEMDGFEATRQIRLMEHEANAQMNGESTFEGTCDNNRSWHMPILAMTADVIHATYDKCLEVGMDGYVSKPFEEENLYQAVAKFFKSKHNGES* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00677 1007 CDD REC_hyHK_CKI1_RcsC-like 863 995 - -
Pte11g00677 1007 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 448 IPR036097 GO:0000155|GO:0007165
Pte11g00677 1007 PANTHER TWO-COMPONENT HISTIDINE KINASE 26 996 - -
Pte11g00677 1007 Gene3D - 358 445 - -
Pte11g00677 1007 Pfam His Kinase A (phospho-acceptor) domain 382 447 IPR003661 GO:0000155|GO:0007165
Pte11g00677 1007 Gene3D - 856 1005 - -
Pte11g00677 1007 Gene3D - 698 839 - -
Pte11g00677 1007 SMART HKATPase_4 494 679 IPR003594 -
Pte11g00677 1007 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 596 692 IPR036890 -
Pte11g00677 1007 ProSiteProfiles CHASE domain profile. 108 321 IPR006189 -
Pte11g00677 1007 Pfam Response regulator receiver domain 863 995 IPR001789 GO:0000160
Pte11g00677 1007 PRINTS Bacterial sensor protein C-terminal signature 663 676 IPR004358 GO:0016310|GO:0016772
Pte11g00677 1007 PRINTS Bacterial sensor protein C-terminal signature 604 618 IPR004358 GO:0016310|GO:0016772
Pte11g00677 1007 PRINTS Bacterial sensor protein C-terminal signature 639 657 IPR004358 GO:0016310|GO:0016772
Pte11g00677 1007 PRINTS Bacterial sensor protein C-terminal signature 622 632 IPR004358 GO:0016310|GO:0016772
Pte11g00677 1007 Coils Coil 432 452 - -
Pte11g00677 1007 ProSiteProfiles Response regulatory domain profile. 704 835 IPR001789 GO:0000160
Pte11g00677 1007 SMART HisKA_10 382 447 IPR003661 GO:0000155|GO:0007165
Pte11g00677 1007 CDD HisKA 382 443 IPR003661 GO:0000155|GO:0007165
Pte11g00677 1007 ProSiteProfiles Response regulatory domain profile. 862 999 IPR001789 GO:0000160
Pte11g00677 1007 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 436 527 IPR036890 -
Pte11g00677 1007 SMART REC_2 861 995 IPR001789 GO:0000160
Pte11g00677 1007 FunFam Histidine kinase 4 354 445 - -
Pte11g00677 1007 SUPERFAMILY CheY-like 860 999 IPR011006 -
Pte11g00677 1007 Gene3D - 446 680 IPR036890 -
Pte11g00677 1007 SMART CHASE_2 108 294 IPR006189 -
Pte11g00677 1007 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 676 IPR003594 -
Pte11g00677 1007 SUPERFAMILY CheY-like 700 836 IPR011006 -
Pte11g00677 1007 CDD HATPase_EvgS-ArcB-TorS-like 499 675 - -
Pte11g00677 1007 Pfam CHASE domain 111 292 IPR006189 -
Pte11g00677 1007 FunFam Histidine kinase 4 112 328 - -
Pte11g00677 1007 Gene3D CHASE domain 112 328 IPR042240 -
Pte11g00677 1007 Gene3D - 59 111 - -
Pte11g00677 1007 ProSiteProfiles Histidine kinase domain profile. 389 679 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00677 Pte-Chr11 7314131 7320681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00677 11 1000 Histidine Kinase Gene Family AT2G01830 71.471 0.0 1435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte11g00677 HATPase_c 2e-31 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00677 K14489 - jre:108993473 1587.39