Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00671 ATGAAGCTACAAGCGAAGAAGAACCAGTTGCAACTTCTAAAGAAGAAGCTCAGGTCGAAGCTTCCTCGCCGGCGACGAACTAAGTTTACTAAGATTCCTCTACCTTCGCTGAGTTTCAAAACAGGAGTCTCTGAGTTCTCAGTTGATTCGAGCTCATGCTCGGACGTTGAAGTCAATGTCGGTGAAGTTTCATGCAACTCGAGCAGAGTTTCGGTTGGATTGAATAAGACAGAGCTGTTGAACGCGAGAAAGAGACATCGCGATAAAGTTATCGGTAACGAAAATGAGGAAGAAGAAAACGATTCGAGAAGTAGAAGATTTCAAAAGCGAAATGAAACTGACTTGCAAGTGTCTGAATCGACATGTGTGGATTCTAGTTCTATTGTTCGGGGCTTGAAGTTGAACGCAAGCTATGATGAAGGAGCTCGGTGTCTGAGAGAAACTGAAGGTGTGACTAAATCTGATATTACTTGTACTGATCAAATTTCTTCTGAAAACTGGAAGTACGATGGTTCTGTTTCCTCTGGTGATAAGAATCTCAAAGCTGTTTCTCATTTTTCTGAAAATGATGACGTCTCCACTACTTCTGGCGTTATTGACAAGCAGCATGCAAATCAATGTGGAACAGCAAGAGAATCAGAACTCGAAGCCTCGGCCGTTTCTGGGAGTGAAATTTATGCCAGTTGCAATGATTCTCATGCAGAATCGAAGATAAATCATTTTCCTGTCGAGTTTGATTCTGATCTTGCCTGTACTGAAGAATTGCCATCAGAAGACGTCTCAGAATACTACACATCAAGCCACGAGACTGTTTTTTCTGAACTGCAATCGGAATTCTTCACTGAATACTCAGATTTTGATTTTTCGGAGAGTTCTCCATCCCTATTCGATTCCGGAAGTGATTTTTCTCAAGGATCATTTGAATCCAATCGTTCACCTACGTTTGCTCAGTTTCTTCAGTACCGTGAAGAATTTTCAAGGTCAATTATTCCATCCGATTGTTCAATCTCTCAAGGAGCTGATGACAAGGAAAAGTTATTATTGGAAAATTTGGACGACGAAGAGAGCTACTGGATGTTAAGAGCCAGAGAGAGGAGAAAGGTTTTTCGACACAACTACACAGAAAGGTACTGTTCCACCACAGAATACGGTGATCTCATCCTTCAGCAAAGGTCACAGATGGTCCACTGGATCGTAGAGCAATCTGACAAAAAGAAGCTTCGGCAAGAGACGTTGTTTCTCGGAGTTAGCGTATTAGACCGGTTCCTAAGCAAAGGATACTTCAAAGACAAAAGGTGCCTTCAAATTGTTGGAATAGCTTCTCTTACATTAGCCACCAGAATGGAAGAAAATCAGCCTTACAACAGTGTTACGCAGCATAACTTCAATGTAAAAGACAATGTCTACAGCAGACACGAAGTGATCGCTATGGAATGGATGGTGCTGGAAGTTCTCAACTTCGAATGCTTTCTACCCACCATTTTCAACTTCTTATGGTTCTACCTAAAAGCCGTTAGAGCTGATGGAATGTTGGAGAAGAGGGTCAAGTACTTAGCAGTGTTATCGCTGTCAACTCACGAACACTTATGCTACTGGCCTTCGATAGTTGCTGCTGCGCTTGTAATCTTGGCTTCTCCACAATTCAGTCGTCAAATATCCCACCAAGTCTTACTGACACATTTTAGACCGCAAGATGAGTTACAAGAATGCATAAAGAGTCTACAGTGGTTGGTGCGATATGTATGA 1746 0.4204 MKLQAKKNQLQLLKKKLRSKLPRRRRTKFTKIPLPSLSFKTGVSEFSVDSSSCSDVEVNVGEVSCNSSRVSVGLNKTELLNARKRHRDKVIGNENEEEENDSRSRRFQKRNETDLQVSESTCVDSSSIVRGLKLNASYDEGARCLRETEGVTKSDITCTDQISSENWKYDGSVSSGDKNLKAVSHFSENDDVSTTSGVIDKQHANQCGTARESELEASAVSGSEIYASCNDSHAESKINHFPVEFDSDLACTEELPSEDVSEYYTSSHETVFSELQSEFFTEYSDFDFSESSPSLFDSGSDFSQGSFESNRSPTFAQFLQYREEFSRSIIPSDCSISQGADDKEKLLLENLDDEESYWMLRARERRKVFRHNYTERYCSTTEYGDLILQQRSQMVHWIVEQSDKKKLRQETLFLGVSVLDRFLSKGYFKDKRCLQIVGIASLTLATRMEENQPYNSVTQHNFNVKDNVYSRHEVIAMEWMVLEVLNFECFLPTIFNFLWFYLKAVRADGMLEKRVKYLAVLSLSTHEHLCYWPSIVAAALVILASPQFSRQISHQVLLTHFRPQDELQECIKSLQWLVRYV* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00671 581 Gene3D - 360 574 - -
Pte11g00671 581 ProSitePatterns Cyclins signature. 391 422 IPR006671 -
Pte11g00671 581 Gene3D - 369 490 - -
Pte11g00671 581 MobiDBLite consensus disorder prediction 88 112 - -
Pte11g00671 581 Pfam Cyclin, N-terminal domain 356 488 IPR006671 -
Pte11g00671 581 PANTHER CYCLINS 344 575 IPR039361 -
Pte11g00671 581 Pfam Cyclin, C-terminal domain 492 576 IPR004367 -
Pte11g00671 581 SUPERFAMILY Cyclin-like 492 578 IPR036915 -
Pte11g00671 581 SMART cyclin_7 396 483 IPR013763 -
Pte11g00671 581 PIRSF Cyclin_A_B_D_E 56 225 IPR046965 GO:0016538|GO:0044772
Pte11g00671 581 PIRSF Cyclin_A_B_D_E 288 580 IPR046965 GO:0016538|GO:0044772
Pte11g00671 581 SUPERFAMILY Cyclin-like 347 488 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00671 Pte-Chr11 7251923 7255463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00671 385 544 Core Cell Cycle Gene Families AT5G11300 36.145 2.21e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00671 K21777 - qsa:O6P43_032469 494.582