Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00660 ATGGCTGCTTTGCAAAGACTACATTCGAGTTTATGTACTAACACTGGAAGCTATGATTCACGTGTAACTCAGCAAAATCTGGTTTCTGATCAGTTTCCTACTGGTTTGAGGGTTTTGGTCGTAGACGATGATGTAATTACCTTGAAGATTCTCGAAAAGATGTCTCGTAGATGTCAATACCACGTTACCACTTGTTCTCAGGCTGCCGTTGCTTTGAACCTTCTAAGAGAAAGAAAAGGCTGTTTTGATGTGGTACTTAGTGATGTTCACATGCCAGACATGGATGGTTATAAACTCCTTGAGCATATTGGTCTGGAAATGGATCTTCCTGTTATTATGATGTCCGCTGATGGTAGCACAAGTGCAGTGATGAAAGGAGTTAAGCATGGGGCTTGTGATTATTTGATAAAGCCCGTACGCGAGGAAGAGATGAGGAATATTTGGCAACATGTTGTGAGGAAACGGTGGACTGAGAATAAAGAAAATGAAAATTCAGGCAACTTAGATTTTAATAATAGGCTAAAAACAACAAACAATGATGTAGAATATACATCTTCTGCTAATGAAGAAATAGAAAGAAAACTAAAAGCCCCCCAAAAGAGGAACAGTTCAAAAGAAGATGAAGAAGCTGAAAATAAACAGGAGAGTGATGATCCGTCCACATCAAAGAAACCCCGTGTGGTTTGGTCAGTGGAATTGCATCAACAATTTTTCAATGCTGTATGCCAACTTGGTCTTGACAAGGCTGTGCCCAAGCGAATACTCGAGTTGATGAACGTACCTGGTTTGACTAGAGAAAATGTTGCAAGCCATTTGCAGAAATTTAGGCTCTATTTGAAGAGAATTAATGAAGTGGTTCCACAACAGAGTGAGGTCTCAATTTGCAGATCCGTAGAATCAAATGATAAGTTGGCTGCACTTGGAAGATTTGACATACAAACATTAGCTGCATCTGGCCAAATTCCTCCACAAACACTAGCTGCTATACATTCTGAGCTTTTTGGCCTCCCTATAGGTAACTTGCGTGGTGATGATCCTACTCTTGTTCAAAGAATTGTGCAGGGGTCCAAATACTCGCCTGTCGGACTTGGTGTTACATATGACCAGCCTCAAACAAGATGTCCCCCCAATGTTGTCAAGCAATGTCCGCAATCAACTTTAACAGGTGAGAATGCATCTCATGGCTATGGAGCATGGCCATCAAGTTGCATTAGTTCGGTCGGACTGAAAAACAGTCTGGGAGGAATGGTTGCTCAGAATGGTAATATGTTGGATGTCTTACAGCAGCAGCAGCAGCAGAAAAAGCAGTTTCAAGTTCCACAGCAGCATTCTTGGCTACCTGATAGTAGCCATTTAATTAGTGTACAGCCTTCATGTTTGGTGGTTCCGTCACAAGCTTCTTGCAGTTTGCAGGTTGGAAATAGTGCCTCTTCTGTTAATCAGAAATGCAGCTTCAACACTGATTATAGTTTTGTTTCATCTCAACAAAATAATTCTTTAAAGAATACGAGTCCATTTCTTGAGCCTGGTTCCAATAGTGGGCGTTTTCCTGGGAGACACACTGCACCAGCCTCTATTTCTTCTGTTGGATTTTGTTCAAAGACAAATGGCAACTTTCACGAAGACTCGACATCTTCTGTTGTTGGACAAGTGCCAGTATTTAATCCTGACATGTGTGAGATACAAGGCTCCTTTGATCTTAAATCCAAGGAAGTTCTTCGACAAAGGTCTCTTGGCACTGCTGGATTTGTTGGAAATGAAACCCTCATACCAAGTAACTTTGCCGTGAATGACTCCGGATTACCTACGAGTAACTCGACTCACTGA 1827 0.4154 MAALQRLHSSLCTNTGSYDSRVTQQNLVSDQFPTGLRVLVVDDDVITLKILEKMSRRCQYHVTTCSQAAVALNLLRERKGCFDVVLSDVHMPDMDGYKLLEHIGLEMDLPVIMMSADGSTSAVMKGVKHGACDYLIKPVREEEMRNIWQHVVRKRWTENKENENSGNLDFNNRLKTTNNDVEYTSSANEEIERKLKAPQKRNSSKEDEEAENKQESDDPSTSKKPRVVWSVELHQQFFNAVCQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRINEVVPQQSEVSICRSVESNDKLAALGRFDIQTLAASGQIPPQTLAAIHSELFGLPIGNLRGDDPTLVQRIVQGSKYSPVGLGVTYDQPQTRCPPNVVKQCPQSTLTGENASHGYGAWPSSCISSVGLKNSLGGMVAQNGNMLDVLQQQQQQKKQFQVPQQHSWLPDSSHLISVQPSCLVVPSQASCSLQVGNSASSVNQKCSFNTDYSFVSSQQNNSLKNTSPFLEPGSNSGRFPGRHTAPASISSVGFCSKTNGNFHEDSTSSVVGQVPVFNPDMCEIQGSFDLKSKEVLRQRSLGTAGFVGNETLIPSNFAVNDSGLPTSNSTH* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00660 608 MobiDBLite consensus disorder prediction 186 222 - -
Pte11g00660 608 FunFam Two-component response regulator 36 173 - -
Pte11g00660 608 Pfam Myb-like DNA-binding domain 226 274 IPR001005 -
Pte11g00660 608 NCBIfam myb-like DNA-binding domain, SHAQKYF class 224 277 IPR006447 GO:0003677
Pte11g00660 608 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 429 IPR045279 GO:0009736
Pte11g00660 608 Gene3D - 36 170 - -
Pte11g00660 608 SMART REC_2 36 148 IPR001789 GO:0000160
Pte11g00660 608 Gene3D - 220 283 - -
Pte11g00660 608 SUPERFAMILY Homeodomain-like 221 281 IPR009057 -
Pte11g00660 608 SUPERFAMILY CheY-like 34 169 IPR011006 -
Pte11g00660 608 Pfam Response regulator receiver domain 38 146 IPR001789 GO:0000160
Pte11g00660 608 FunFam Two-component response regulator 220 283 - -
Pte11g00660 608 MobiDBLite consensus disorder prediction 183 223 - -
Pte11g00660 608 CDD REC_typeB_ARR-like 38 152 - -
Pte11g00660 608 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 280 IPR017930 -
Pte11g00660 608 ProSiteProfiles Response regulatory domain profile. 37 152 IPR001789 GO:0000160
Pte11g00660 608 PIRSF RR_ARR_type-B 17 603 IPR017053 GO:0003677|GO:0003700|GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00660 Pte-Chr11 7138433 7143495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00660 22 290 Response Regulator Gene Family AT2G25180 57.407 6.95e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pte11g00660 Response_reg 1.3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00660 - K14491 rcu:8270676 650.588