Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00659 ATGGCGATTGCGAAGGACGAAGAGCTTGATTGCTATGGGAAGAGATTGAAACTTACGGAAGCTGAAAGAGAGCATCAAGCTACAGGCGAAGAAGCCAGTGAACTTCCATTGAAACCCAGCTTGTGCTATCCCATGACACCCACATCTTTCGTTGTGTCAGATGCTCTTGACCCCGATTTTCCAATGATCTATGTTAACAAAGTCTTCGAGCTGTTTACTGGGTACCGAGCTGATGAGGTTCTTGGGCGAAACTGCCGTTTCCTGCAGTACAGAGATCCTCGTGCACAAAGGCGACACCCTTTGGTGGACCCTGTTCTTGTATCTGAGATTAGAACATGTCTTGAAGATGGTACTGAGTTCCAAGGTGAACTTCTTAATTTCAAGAAGGACGGCACTCCTTTACTGAACAGACTAAGACTTTTACCTATACATGATGATGATGGAATTGTCACACATGTAATAGGCATTCAGGTTTTTTCTGAAACAAGTATAGATCTGAACCGTTTATCATATCCAGTTTTTAAGGAGACTTGCGATCAGGAATTGGAAAAGACAGGAGAATATTCTGCTCTTGGAAAGTCACTTAGTTGTCATCACCAAGAACTATGTGGCATTCTTCAACTCTCTGATGAGGTATTGGCTCACGACATTCTTTCACGATTGACACCAAGGGATGTTGCATCTATTGGATCTGTCTGCAGAAGGATCCGGCAATTGACAAAAAATGAGCACATGAGGAAGTTGGCGTGTCAAAATGCTTGGGGGAGGGAAGTCACTGTTGCACTGGAGCTGATGAGTAAAAAGTTAGAATGGGGTCGTTTGACCAGAGAGCTAACAACTCTCGAGGCAGTTTGCTGGAAAAAATATAGGGTTGGAGGTGCAGTTGTGCCTTCACGTTGCAATTTCAGTGCTTGTGCTGCTGGAAATAGACTTGTGCTGTTTGGAGGTGAAGGCGTTGATATGCAACCTATGGATGACACTTTTGTCCTCGATATGGATGCAGCTAATCCAGAATGGCGTAGAGTAAGTGTAAAAAAATCGCCTCCAGGGAGATGGGGTCATACTCTTTCATGTTTGAATGGATCATGGTTGGTGGTGTTTGGAGGATGTGGTAGGCAAGGACTGCTGAATGATGCATTTGTGCTTGACTTGGACGCCAAGCAACCTATGTGGAAGGAGGTTTCAGGTGGAACACCGCCACTTCCTAGATCCTGGCACAGCTCTTGCACAATTGATGGCTCTAAGTTGATTGTCTCAGGTGGGTGCACAGATGCTGGGGTACTGCTTAGTGACACATTCTTACTGGATCTGACAACAGACCGCCCATCATGGCGAGAAATTCCAACATCATGGGCTCCTCCTTCTCGTTTGGGACACTCTCTTTCAGTGTATGGTAAGAAAAAAGTCCTCATGTTTGGGGGTCTTGCCAAGAGTGGGCACTTACAGCTGAGATCAGGTGAGGCCTATACCATTGATTTAGATGATGAAAACCCCAGATGGAGGCAACTGGACTGTAGTGCATTCACTGGTGTTGGCAGTCAGAGCGCAGTGGTTCCTCCTCCAAGACTTGATCATGTTGCTGTCACAATGCCATGTGGGCGGATTATCATTTTTGGTGGTTCCATTGCGGGGCTTCACTCTCCATCACAACTCTTCCTTTTGGATCCTTCTGAGGAGAAGCCGTCATGGCGGATCCTCAATGTTCCTGGACAACCTCCTAAATTTGCTTGGGGTCATAGTACTTGTGTCGTTGGAGGTACTAGAGTTCTAGTACTGGGCGGGCAAACTGGGGAAGAATGGATACTGAACGAATTGCATGAGTTGTGCTTGGCTAGTAGGCAAGATTCTGACCTGTGA 1857 0.462 MAIAKDEELDCYGKRLKLTEAEREHQATGEEASELPLKPSLCYPMTPTSFVVSDALDPDFPMIYVNKVFELFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVLVSEIRTCLEDGTEFQGELLNFKKDGTPLLNRLRLLPIHDDDGIVTHVIGIQVFSETSIDLNRLSYPVFKETCDQELEKTGEYSALGKSLSCHHQELCGILQLSDEVLAHDILSRLTPRDVASIGSVCRRIRQLTKNEHMRKLACQNAWGREVTVALELMSKKLEWGRLTRELTTLEAVCWKKYRVGGAVVPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLDMDAANPEWRRVSVKKSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDAFVLDLDAKQPMWKEVSGGTPPLPRSWHSSCTIDGSKLIVSGGCTDAGVLLSDTFLLDLTTDRPSWREIPTSWAPPSRLGHSLSVYGKKKVLMFGGLAKSGHLQLRSGEAYTIDLDDENPRWRQLDCSAFTGVGSQSAVVPPPRLDHVAVTMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGQTGEEWILNELHELCLASRQDSDL* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00659 618 Gene3D - 199 248 - -
Pte11g00659 618 SUPERFAMILY F-box domain 203 277 IPR036047 GO:0005515
Pte11g00659 618 Gene3D - 479 613 IPR015915 GO:0005515
Pte11g00659 618 SUPERFAMILY Kelch motif 286 504 IPR015915 GO:0005515
Pte11g00659 618 FunFam Putative LOV domain-containing protein 276 481 - -
Pte11g00659 618 FunFam Adagio protein 1 39 168 - -
Pte11g00659 618 Gene3D PAS domain 42 168 - -
Pte11g00659 618 Pfam PAS domain 49 157 IPR000014 -
Pte11g00659 618 Pfam Galactose oxidase, central domain 413 464 - -
Pte11g00659 618 Pfam Galactose oxidase, central domain 364 411 - -
Pte11g00659 618 Gene3D - 278 478 IPR015915 GO:0005515
Pte11g00659 618 ProSiteProfiles PAS repeat profile. 55 93 IPR000014 -
Pte11g00659 618 NCBIfam PAS domain S-box protein 57 156 IPR000014 -
Pte11g00659 618 FunFam Putative LOV domain-containing protein 482 614 - -
Pte11g00659 618 Pfam F-box domain 205 242 IPR001810 GO:0005515
Pte11g00659 618 Pfam Galactose oxidase, central domain 299 349 - -
Pte11g00659 618 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 40 612 - -
Pte11g00659 618 Pfam Kelch motif 523 570 IPR011498 GO:0005515
Pte11g00659 618 SUPERFAMILY PYP-like sensor domain (PAS domain) 56 157 IPR035965 -
Pte11g00659 618 CDD PAS 55 156 IPR000014 -
Pte11g00659 618 SUPERFAMILY Kelch motif 516 609 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00659 Pte-Chr11 7122375 7125586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00659 49 170 AGC Kinase Gene Family AT5G58140 35.484 1.74e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00659 K12116 - mnt:21388994 1075.08