Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00643 ATGTGCGGCTTACCGGCAACAATCTGGTTAGGTCATCCTGGCGTAAAGATGTTATCAGTGCCCAACAAAGCAATTTCAGTTCCTATGGATGACAACACTTTCTTCGAGAATCGTCTGGCAGCTGCTGGTCAAAATCCGGAAGCTTCCATGCATGGGATGAATGTGGTTTGCGGAAAAAACAGTTTCAAGCCCTCTTGTCCTTCTCAATTGACAATTTTCTATGCTGGCACTGTGAATGTATTTGATGATATCTTACCTGATAAGGTTGAATCTGGCAGTACAAACTTGGAGCCCAGCAATGGTCTTCCTGCTAATCAACCTTTGAATTTTAATCAACCCATTAGCACGGAACTTCAATCTTGTCTGTCAAGCCCTTTATCAGTATCTTCCTACAATGCAGCTCAGTCAGCTATTGGTTCAACGAGCACCACTGATTTTCTGTTTGCTCAAACAATTGGTATAATCTCCTTTGGATAG 477 0.4256 MCGLPATIWLGHPGVKMLSVPNKAISVPMDDNTFFENRLAAAGQNPEASMHGMNVVCGKNSFKPSCPSQLTIFYAGTVNVFDDILPDKVESGSTNLEPSNGLPANQPLNFNQPISTELQSCLSSPLSVSSYNAAQSAIGSTSTTDFLFAQTIGIISFG* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00643 158 SMART tify_2 63 93 IPR010399 -
Pte11g00643 158 Pfam tify domain 67 90 IPR010399 -
Pte11g00643 158 ProSiteProfiles Tify domain profile. 63 98 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00643 Pte-Chr11 6783695 6784353 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte11g00643 tify 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00643 K13464 - gmx:100807043 98.5969