Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00640 ATGATAAGCCTTTTGTTCAAAACTTACTTCACCACTTTTAATAAACATAGCAGTATTGGTGTTTGTTCTGCAACCCCTCTTTGGATTCCACAGAAAATGGCTGGACAATCAGACCAAAGAATGTCTCTGTTCTCTGCAGAGGAGCTTGAGTTTATAGCTGAGGATGAAAAGGTAGAAGTAGTGCCCAATCTCAGAATGGAGCCTCTCAATCTTATTTGTGGAGATTTTGGGCCCTTTTTGCCTCAAATTGCTTGTGAAGTACCCCTCTGGTTAGCAGTTGCACTGAAGAAGAGAGGGAAATGTTCTATTCGGCCACCGCAATGGATGTCAGTTGATAAGTTGACGAAAGTGCTGGAGTCTGAAAGAGAATCGCAAGAGATGTCTGACCAACTACCATTTCATTATGTCGAAATCTCAAGACTTCTTTCTGATCACGCACGTGATGACATTCCTGATGTGTATATGGTGAGGTCTCTCATTGAGGATATCAGGGATGTAAGATTCCATAAAGTAGAGACTGACTTAGAGGCATTTAATGGACGAACAGTGGCTGTGAAGATTAAAAATCTATCAGCTATGGAAGTGAACATAGTCCGCCCGTTTATTGGGAGAGCTCTTCAGGCATTTTATAAGCATGACAGCCCGGAGTTGATACCAGATCCTGAAAGGGTATCAGAGCGTCGTCAACAAGTGACCAATACTGCACCAAGACGTCAACTCCGACGGTGA 729 0.4307 MISLLFKTYFTTFNKHSSIGVCSATPLWIPQKMAGQSDQRMSLFSAEELEFIAEDEKVEVVPNLRMEPLNLICGDFGPFLPQIACEVPLWLAVALKKRGKCSIRPPQWMSVDKLTKVLESERESQEMSDQLPFHYVEISRLLSDHARDDIPDVYMVRSLIEDIRDVRFHKVETDLEAFNGRTVAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVSERRQQVTNTAPRRQLRR* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00640 242 PIRSF GINS_PSF2 34 242 IPR007257 GO:0005634|GO:0006260
Pte11g00640 242 Pfam GINS complex protein 85 194 IPR021151 -
Pte11g00640 242 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 40 236 IPR007257 GO:0005634|GO:0006260
Pte11g00640 242 CDD GINS_B_Psf2 45 106 - -
Pte11g00640 242 FunFam DNA replication complex GINS protein PSF2 110 226 - -
Pte11g00640 242 FunFam DNA replication complex GINS protein PSF2 44 109 - -
Pte11g00640 242 Gene3D - 110 218 - -
Pte11g00640 242 CDD GINS_A_psf2 98 214 - -
Pte11g00640 242 Gene3D - 44 109 - -
Pte11g00640 242 SUPERFAMILY GINS helical bundle-like 105 213 IPR036224 -
Pte11g00640 242 SUPERFAMILY PriA/YqbF domain 44 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00640 Pte-Chr11 6744776 6748360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00640 33 178 Core DNA Replication Machinery Family AT3G12530 70.548 8.96e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00640 K10733 - qsa:O6P43_017396 375.941