Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00625 ATGAACAGAACGACCAGCACCCAATTATCTATTAGAGTATTGTGCTGTAAAGCAATACCACTTTCCTCAATGGCAAGCATTGACCAGAAACCATGTGTAGTAATCAAAATGAAGGATCTAACATGGGTTAAACCTTCACTGCCGACACCATCTGGATTTCTTTCTTTGTCTACCATTGACAGTGATTTCGACCAAGATCTCCCTTCTTATAGCGTTCATGTATACAGAGCAAACTTTCATTCAGTCAACCATGGCGACAACAACTCCAAATTATCGAATGCACAAGTGTTGGATCCAGCCAATACGATAAAGGAAGCTCTCTCTAGGGCTTTAGTTTATTACTACCCTCTAGCTGGAAAGTTGCAGCGTCATGAGTATGGAAGACTTAGAGTCAATTGTAATGCTGCTGGGGTGCCATTTGCAGTTGCATCTGCAAGCTGCAAACTTTCTGATGTGAACTATTTTGATGGCGCCGCCGTTGAAAGCGCAAGGCACTTGGTTTGCGATTTCCCTGATGAAGATGACACTAAAAGCAGACACCCTTTTGTGCTGCAAGTGACGAGATTCCTATGTGGAGGGTTCACTATAGGAATGGGAACTTGGCATGCTATATGCGATGGAATGGGGGCACTTCAGATTTACCATACTATAGCAGAGATGGCATGTGGGAAGAATGAGCCTTCAGTGAAACCTGTGTGGGAGAGGGAAAGATTGCAAGGATGGGTTGTGAAGAAACTTGAGTTCCCAATGGATCCTGCTGCTGCTGCAGTTTCACCTCATTTGCCGTCAGAAGATCTAACTTTTGAATGCTTTCATGTGGATGAGAAGAGTCTCATGAAACTCAAGATGAATTTATCCAAAGAATCTGACAACCTGCTACCCATGGAAAAGAGCTTAACAACAGTTGAAGCACTAGGAGCTTATTTATGGAGATCAAGGTGTAAAGCTTTTGAGTTGAATGCAGATGGAAAAACTTTGTTGTTTTTAACAGTGGGGATCAGAAAGCGCATGAATCCACCTTTGCCTAAAGGGTACTACGGGAATGCTTATTTAGGTGCTTATATTGTGATGGATGTGAAGGCTCTGTTTGAAGGGCCTCTCATCAATGTCGTCAACCTCATCAAAGAGCACAAAAGGCTTTCTTTTAAGGATGACTTCATAAGGCAGTCTCTGAATTACATGGAGACTATTAGACAAAGCGGAATAGAACTCCAAACTCCTGGTGCTTTCATGGAGTTAACAGAGTGGAAGCAGTTTGGAGTGATGCAAGAGGTTGACTTCGGGTGGAGTGCATCAGTGAATATGATACCAACAGCAAGAAACTGGTTGGAGAACTTGGATTCATGCATCATAATGCCTCCATCTAATTTGGATCCCTCCATGAAAGGTGGGGCAAGAGTTTTCATCACCCTTCCTAAGGTATGTATGTCCAAGTTTAGGCAAGAAATGGAAGCCTTAAAGTCATTTGATTACTGA 1476 0.4275 MNRTTSTQLSIRVLCCKAIPLSSMASIDQKPCVVIKMKDLTWVKPSLPTPSGFLSLSTIDSDFDQDLPSYSVHVYRANFHSVNHGDNNSKLSNAQVLDPANTIKEALSRALVYYYPLAGKLQRHEYGRLRVNCNAAGVPFAVASASCKLSDVNYFDGAAVESARHLVCDFPDEDDTKSRHPFVLQVTRFLCGGFTIGMGTWHAICDGMGALQIYHTIAEMACGKNEPSVKPVWERERLQGWVVKKLEFPMDPAAAAVSPHLPSEDLTFECFHVDEKSLMKLKMNLSKESDNLLPMEKSLTTVEALGAYLWRSRCKAFELNADGKTLLFLTVGIRKRMNPPLPKGYYGNAYLGAYIVMDVKALFEGPLINVVNLIKEHKRLSFKDDFIRQSLNYMETIRQSGIELQTPGAFMELTEWKQFGVMQEVDFGWSASVNMIPTARNWLENLDSCIIMPPSNLDPSMKGGARVFITLPKVCMSKFRQEMEALKSFDY* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00625 491 Gene3D - 252 483 IPR023213 -
Pte11g00625 491 PANTHER ACYL TRANSFERASE 4 35 485 - -
Pte11g00625 491 Pfam Transferase family 37 485 - -
Pte11g00625 491 Gene3D - 32 249 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00625 Pte-Chr11 6627689 6629497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00625 35 481 Monolignol Biosynthesis Gene Families AT5G48930 28.814 3.58e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00625 K20240 - gmx:100801843 496.123