Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00620 ATGCGGTTGCAGCTAAAGCCAAGGCAAGTTGAGGTGTGGTTTCAGAACCGTAGGGCCAGGAGCAAGCTGAAGCAAACTGAGATGGAATGCGAATACTTGAAGAGATGGTTTAGGTCACTGACTGAGCAAAACCGAAGGCTACAACGGGAAGTCGAGGAGCTAAGAGCCATGAAAGTTGGTCCAACCACAGTGATCTCTCCTCACAGTTGGGAGCCACTCCCAGCTTCAATATTAACAATGTGCCCCCACTGCGAGCGTGTCACAACCATCAACACAGACGGAGGTCCTACCAAGGGTGATTCTGCTGCTACCTTGACCTCTAAAGTGGGGACTCCGTCAGTACAGCACCGGCGACCATCGGCAGCTTGTTAG 372 0.5215 MRLQLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFRSLTEQNRRLQREVEELRAMKVGPTTVISPHSWEPLPASILTMCPHCERVTTINTDGGPTKGDSAATLTSKVGTPSVQHRRPSAAC* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00620 123 MobiDBLite consensus disorder prediction 90 114 - -
Pte11g00620 123 Pfam Homeobox associated leucine zipper 24 58 IPR003106 GO:0006355|GO:0043565
Pte11g00620 123 CDD homeodomain 2 25 IPR001356 GO:0003677
Pte11g00620 123 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 2 104 - -
Pte11g00620 123 MobiDBLite consensus disorder prediction 90 123 - -
Pte11g00620 123 Coils Coil 37 57 - -
Pte11g00620 123 ProSiteProfiles 'Homeobox' domain profile. 1 24 IPR001356 GO:0003677
Pte11g00620 123 SMART halz 24 67 IPR003106 GO:0006355|GO:0043565
Pte11g00620 123 Pfam Homeodomain 2 22 IPR001356 GO:0003677
Pte11g00620 123 Gene3D - 1 31 - -
Pte11g00620 123 SUPERFAMILY Homeodomain-like 2 33 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00620 Pte-Chr11 6594228 6595296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00620 3 98 Homeobox Transcription Factor Family AT1G70920 62.887 5.89e-34 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte11g00620 HALZ 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00620 K09338 - qsa:O6P43_032613 198.749