Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00619 ATGGGGGTGCATTTCAAATCAAGATGGGAAAATCCTGTTATGACTGTCGTCCCGGAATACGAATATGACGCATTAGTCGCAAATCGCCGTGAAGAAGCCAAAAGGTTCATAGTAGACGATGACGGTTTAGGATATGGTGATGAAGGCGAAGAAGAGGATTTGTCAGTCACTGGGTTACGTCCGTCTACAGATGAATCAGAAGATGAAAATGAAAGGCCCAAGAATCGAGAGAAGATTGAGAAGAAAGATCCACAAGTTAAAAAGCCACCTCCTTCTTCTCTTTCGGCTGCGTCAATCGGTAACCAACGGTTGTCGTCTATGTTCACTTTATCGGTGTTCAAGCAAAGCAATAAGAAAGATCCACAACTTGAACAACCACTGTCGGCTCTGACCAGTACAATACAGCTTTTGCAAACTCGCCGTAGAATCAGTGACTTGCGTAAAATTGTGTACAAAATTGTGAACTAG 468 0.4316 MGVHFKSRWENPVMTVVPEYEYDALVANRREEAKRFIVDDDGLGYGDEGEEEDLSVTGLRPSTDESEDENERPKNREKIEKKDPQVKKPPPSSLSAASIGNQRLSSMFTLSVFKQSNKKDPQLEQPLSALTSTIQLLQTRRRISDLRKIVYKIVN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00619 155 MobiDBLite consensus disorder prediction 37 100 - -
Pte11g00619 155 MobiDBLite consensus disorder prediction 53 87 - -
Pte11g00619 155 Pfam DNA polymerase alpha subunit p180 N terminal 11 52 IPR024647 -
Pte11g00619 155 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 11 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00619 Pte-Chr11 6585237 6586045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00619 2 149 Core DNA Replication Machinery Family AT5G67100 40.881 1.38e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00619 K02320 - gmx:100798779 122.864