Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00585 ATGATATTGAGTACTGAAGATCACAGTGAAGTAATGCAAAATGTTGCCGGTAAAAGTGGAATCCAGTTATCTTTTATTCCGGCGGTTCCCCATAAACATTTGGAGGAAGGCAGCTGTGAGCAAAATGGTGAAATAGATGCAGATAAAGTCTTTCAGGGAAATATTAAAATGTCAAGTGAGGCGCCTGCATTGATTTTGTATACTAGTGGGACGACTGGTAAGCCCAAGGGTGTTGTTCATACGCACAGAAGCATCAGTTCCCAGGTCCAAACATTGGCAAAAGCATGGGATTACACATCTGTGGATCAATTTCTCCACTGTCTTCCACTACACCATGTTCATGGGCTTTTCAATGCTTTACTTGCCCCCCTGTATGCCGGTTCCACAGTTGAATTTATGCCAAAATTTAGTGTAAGGGGAATATGGCAGAGATGGCGTGAATCATATCCTCCTGATGAACACAAATGTGATGCTGTAACTGTCTTCACAGGGGTTCCAACAATGTACACCCGATTGATTCAAGGTTATGAAGCAATGGATCCAGAGCTACGAACTCTTTCTGCATCTGCTGCAAGGAAGTTGCGGCTTATGATGTGTGGATCCTCTGCACTCCCTCAACCTGTTATGCAAGAGTGGGAAACAATCACTGGGCATAGGCTATTGGAGAGGTATGGCATGACAGAATTTGTCATGGCTATATCAAATCCCTTGGAAGGTGCACGCAAAGCAGGTACTGTGGGCACCCCATTTCCTTCTGTTGAGGTAAAGATTCTTGAAGACGATGAGAGCGCAGATGGTAGTAAAGTGAGTGAGCTTTGTGTTAAAAGCCCTTCATTATTCAAAGAATATTGGAAACTTCCAGAGGTGACTAAAGACTCCTTTACCAATGATGGGTTTTTCAAGACTGGAGACGCTGTCACTACAGATGAAGATGGATATTACATCATCCTCGGACGTACTAATGCTGATATCATGAAGGTTGGTGGCTACAAGTTATCAGCACTAGAAATTGAATCAGTGCTATTGGAGCATCCAGCTATCTGTCAATGCTGTGTCCTAGGCTTACCAGACGAAGATTATGGGGAGTCAATTTGTGCTATTGTCGTTCTTGAGCCAGATGCTAAAGGGGATGAAGATTCAAAATCTGCATTCAGCTTGGGAGAATTGCGTTCTTGGGCTAAAGAAAGACTTGCACCATACAAGATACCAAATCGGTTGTTCTTGTGGGAGTCCTTGCCTCATAATGCCATGGGAAAGATCAATAAAAAGGAGTTGAAGAAAAAGCTGGCTGAAGAAAACTGA 1302 0.4324 MILSTEDHSEVMQNVAGKSGIQLSFIPAVPHKHLEEGSCEQNGEIDADKVFQGNIKMSSEAPALILYTSGTTGKPKGVVHTHRSISSQVQTLAKAWDYTSVDQFLHCLPLHHVHGLFNALLAPLYAGSTVEFMPKFSVRGIWQRWRESYPPDEHKCDAVTVFTGVPTMYTRLIQGYEAMDPELRTLSASAARKLRLMMCGSSALPQPVMQEWETITGHRLLERYGMTEFVMAISNPLEGARKAGTVGTPFPSVEVKILEDDESADGSKVSELCVKSPSLFKEYWKLPEVTKDSFTNDGFFKTGDAVTTDEDGYYIILGRTNADIMKVGGYKLSALEIESVLLEHPAICQCCVLGLPDEDYGESICAIVVLEPDAKGDEDSKSAFSLGELRSWAKERLAPYKIPNRLFLWESLPHNAMGKINKKELKKKLAEEN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00585 433 Gene3D - 1 319 IPR042099 -
Pte11g00585 433 Gene3D - 321 433 IPR045851 -
Pte11g00585 433 ProSitePatterns Putative AMP-binding domain signature. 65 76 IPR020845 -
Pte11g00585 433 CDD MCS 62 421 - -
Pte11g00585 433 PANTHER ACYL-COA SYNTHETASE 39 430 - -
Pte11g00585 433 Pfam AMP-binding enzyme C-terminal domain 336 419 IPR025110 -
Pte11g00585 433 SUPERFAMILY Acetyl-CoA synthetase-like 56 431 - -
Pte11g00585 433 Pfam AMP-binding enzyme 51 326 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00585 Pte-Chr11 6179545 6184185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00585 63 431 Monolignol Biosynthesis Gene Families AT4G19010 27.415 7.97e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00585 K18660 - qsa:O6P43_018174 652.514