Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00568 ATGCGATGCCAAAGGAGAATGTTTAACGGTGGTCTCTCCTTCAGATTTCAGATTTTGAGAAATCTTATACCTCACAGCGATCAGAAGAGAGACACTGCATCGTTCTTATTAGAGGTGATTCAATATGTACAATATTTACAAGAGAAAGTACAGAAGACTGAGGCTGGGTGGAGTTTGGAGCCTACAAAATTGGTGCCATGGAGAAATAGCCACTGGCGTGTTCCGAGTTTTGTTGGTCAACCGCAAACTGTAAAGAATGGTCTTGGTCCCGCTTCATCTTTTCCTAGAAAGCTGGAGGATATTACACCTTCAGTAAGTACTAGCTCTCAGAATGCAATAGATTCAGAACGTTGCAGGGATAATGGCAGCAAACCAGAGGAGAGGCAACTGGATTTAGCCAACGGATTACCTCCTATGATGCCTCAACAAATGAACATGGCTGGTATGGGCAGAGGTGACAGTGTTCTTGACCATTCTCTACAGGGCCCTGTCTGTGATGCGCAATCATCTGCAACTGAACTGCTAAACCAACAGGAAGAACTGTTAATCGAAGGGGGTACTATAAGCATATCAAGTGTATACTCTGAAGGGTTATTAAATAATTTGACTCAAGCACTGCAGAGCGCTGGTCTGGATCTGACGCAGGCCAGCATCTCAGTTCAGATAAATCTTGGCAAGCGATCAGACAAAGAATTGATCGCCGTATCTTCTTTGCCTGAGGATAACGGAAACCACTCTTCCGACAATCAATTTATGGGACATAGAAGAGATTTAGCCAGTGGAGAGGGCTCGGATATAGCTCAGAAGCGTCTGAAAACATGA 822 0.4428 MRCQRRMFNGGLSFRFQILRNLIPHSDQKRDTASFLLEVIQYVQYLQEKVQKTEAGWSLEPTKLVPWRNSHWRVPSFVGQPQTVKNGLGPASSFPRKLEDITPSVSTSSQNAIDSERCRDNGSKPEERQLDLANGLPPMMPQQMNMAGMGRGDSVLDHSLQGPVCDAQSSATELLNQQEELLIEGGTISISSVYSEGLLNNLTQALQSAGLDLTQASISVQINLGKRSDKELIAVSSLPEDNGNHSSDNQFMGHRRDLASGEGSDIAQKRLKT* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00568 273 MobiDBLite consensus disorder prediction 80 135 - -
Pte11g00568 273 MobiDBLite consensus disorder prediction 258 273 - -
Pte11g00568 273 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 15 273 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pte11g00568 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 58 IPR036638 GO:0046983
Pte11g00568 273 MobiDBLite consensus disorder prediction 99 116 - -
Pte11g00568 273 Gene3D - 4 61 IPR036638 GO:0046983
Pte11g00568 273 MobiDBLite consensus disorder prediction 237 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00568 Pte-Chr11 5939405 5942427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00568 15 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 53.097 2.12e-65 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00568 - - gmx:100816055 303.523