Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00550 ATGACCAAGTCAAAGAATTTCCTTCAGAGTCTCATGAAAAAATTTAAATTTGGTTCCAGGAAGGAAAGCCAAGATGAAGAAGACTTGGAGAAAATAGCAGCACAGGAACAAAAGATCTTTGCTTATGAAACCTTAGTTGCTGCTACTAAAGATTTTCATCCAACCTACAAGCTTGGTGAAGGTGGCTTCGGACCCGTCTACAAGGGCAAATTAGGCGATGGAAGGGAAATTGCAGTGAAAAAGTTGTCGCACAGCTCAACCCAAGGGAACAAAGAATTCAAAAATGAGGCGAAGTTGTTGGCTCGTGTGCAACATAAAAATGTCGTGAATTTAATCGGTTATTGCACCCATGGTATAGAGAAACTACTCGTTTATGAGTATGTTAGCAAAGAGAGCCTTGACAAGCTTCTATTCAAATCCAATAGAGGGAAGGAACTTGATTGGAAGCGGAGATTTGATATAATCACAGGCATTGCAAGAGGCTTGCTCTACCTTCATGAAGATTCACATAACTGCATAATTCACCGCGATATCAAGGCCAGTAACATTTTACTTGATGATAAATGGATCCCTAAGATTGCTGATTTTGGTATGGCACGACTTTTCCCAGAAGATCAATCGCATGTCAATACCCGTGTGGCTGGTACCAATGGATATATGGCTCCCGAGTATGTCATGCATGGACATCTATCAATAAAGGCAGATGTATTTAGCTTTGGTGTTTTAGTTTTAGAGCTGATTAGCGGGCAGAGGAATTTATCTTTCAACTTGCAGGTGGATGCACAGAATCTACTGGACTGGGCATACAAACTGTACAAGAAGGGACGTAGCTTAGAAATAATGGATCCTATCATAGTGAGCTCTGCAGATACAGGACAAGTGGCAATGTCCATTCAACTTGGTTTACTGTGTGTGCAAGGGGATCCTCAGCTACGTCCAGACATGAGACGTGTTGTGGTGATACTGTCCAAGAAGCCTGGCAATATGGAAGAACCAACTAGACCTGGAGTACCGGGGTCTAGATACAGAAGAATCCGAAGACCTGCTGCCCTTTCTTCCACTGGTGGTACTTCTGGTGCTTCTGGTTCTCACACCTTTGACTCCACTTTCAATACTAACAGTGCTACTGCAACCACCTCAGCCACCCCCGGATTGGATCCTCATGGAAAACGACCTATGGAACTTTAG 1188 0.4318 MTKSKNFLQSLMKKFKFGSRKESQDEEDLEKIAAQEQKIFAYETLVAATKDFHPTYKLGEGGFGPVYKGKLGDGREIAVKKLSHSSTQGNKEFKNEAKLLARVQHKNVVNLIGYCTHGIEKLLVYEYVSKESLDKLLFKSNRGKELDWKRRFDIITGIARGLLYLHEDSHNCIIHRDIKASNILLDDKWIPKIADFGMARLFPEDQSHVNTRVAGTNGYMAPEYVMHGHLSIKADVFSFGVLVLELISGQRNLSFNLQVDAQNLLDWAYKLYKKGRSLEIMDPIIVSSADTGQVAMSIQLGLLCVQGDPQLRPDMRRVVVILSKKPGNMEEPTRPGVPGSRYRRIRRPAALSSTGGTSGASGSHTFDSTFNTNSATATTSATPGLDPHGKRPMEL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00550 395 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Pte11g00550 395 SMART serkin_6 52 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00550 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pte11g00550 395 ProSiteProfiles Protein kinase domain profile. 52 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00550 395 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 379 - -
Pte11g00550 395 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Pte11g00550 395 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Pte11g00550 395 CDD STKc_IRAK 58 324 - -
Pte11g00550 395 SUPERFAMILY Protein kinase-like (PK-like) 37 328 IPR011009 -
Pte11g00550 395 MobiDBLite consensus disorder prediction 349 395 - -
Pte11g00550 395 MobiDBLite consensus disorder prediction 351 383 - -
Pte11g00550 395 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Pte11g00550 395 Coils Coil 395 395 - -
Pte11g00550 395 Pfam Protein kinase domain 55 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00550 Pte-Chr11 5659928 5663341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00550 30 336 Receptor kinase-like Gene Family AT4G11530 51.780 1.41e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte11g00550 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00550 - - qsa:O6P43_025863 644.039