Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00549 ATGGAGATTCCTTTAGCAGTTGCTGCGAAAATTGCAGAATATGTAGTGGCTCCAGTCAAACGGCAAGTGGAGTATCTAATTTGGTATGGGAAAAATGTGGAGGATTTGAGGAATAAGACAGAAAAGCTTCAAGAAATAAGGGGCAGTGTGCAACGTTCAGTTGATACTGCCTGGAGAAATGGGGAGGAAATAGAATTAAGCGTTAAGAACTGGTTAGCAAAAGTGGACGAGATCATTGAAAATGTGGAATGCTTTCAAGATGATGAATGCCACAAAAGGGCTGGATGCAACAATTGGACATGCCCTAATTTATGGTCAAGACATCAGCTGAGTAGGAGGGCTAAGAAGATGACAGTTGGTGTTACTGAAATCCATGCGGAAGGGAAGTTTGATAAATTTTCTCATCGCACTTTCCCACAATGGATAGAAACAGCACCTACTACCACAGGATATCAGGAATTTGATTCCAGAGTTTTGATTTTGAATGACATAATGGAGGCACTCAGAGATCCTACAGTAAACATGGTAGGAATATATGGGTTGGCAGGCGTCGGAAAAACCACTCTTGCCGAAGAACTTGCTAAGAAAGCTAAGGAGGACAAGTTATTCGATGTTGTAGCTATGGCAGTTGTATCACAGAAAATGGAGATTGACAAAATTCAGAAACACATTGCTGACATGTTAGGGCTGACATTTGAAGAAGAAAGTGAATTTATAAGAGCAGGCCGCCTAAGAGATAGAATTAAGCAGGAGAACAGTATCCTTGTGATTCTGGATGATCTCTGGGGAATGCTTGACTTGGCGAAGATAGGTATATCTTTCGATAACGATTACAAAGGCTGCAAGATTGTGCTAACATCAAGAAACCAAGAGGTACTATCAAGCCAAATGAATACTCAAAAGGAATTTGGACTAGGTGTCATGCCTAAAGAAGAGGCCTGGAATCTATTTAAGGAGATGGCCGGACTTGATGGTTCTGACGAGAGCACTGAAATTTTGCCCGTAGCTGCTCAGGTTGCAGACGAATGTGCCGGATTGCCTGTAGCTATTGTTACTGTTGCAAGAGCATTGAGGAAGAAGAATTTAATTGAATGGAGGGATGCCCTGCGACAGCTTAAAAATCCCAAATATAGAAACATCACAGGCATGATAGACAACGTTGATTCCTCCATATAG 1176 0.4167 MEIPLAVAAKIAEYVVAPVKRQVEYLIWYGKNVEDLRNKTEKLQEIRGSVQRSVDTAWRNGEEIELSVKNWLAKVDEIIENVECFQDDECHKRAGCNNWTCPNLWSRHQLSRRAKKMTVGVTEIHAEGKFDKFSHRTFPQWIETAPTTTGYQEFDSRVLILNDIMEALRDPTVNMVGIYGLAGVGKTTLAEELAKKAKEDKLFDVVAMAVVSQKMEIDKIQKHIADMLGLTFEEESEFIRAGRLRDRIKQENSILVILDDLWGMLDLAKIGISFDNDYKGCKIVLTSRNQEVLSSQMNTQKEFGLGVMPKEEAWNLFKEMAGLDGSDESTEILPVAAQVADECAGLPVAIVTVARALRKKNLIEWRDALRQLKNPKYRNITGMIDNVDSSI* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00549 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 384 IPR027417 -
Pte11g00549 391 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 19 391 - -
Pte11g00549 391 PRINTS Disease resistance protein signature 175 190 - -
Pte11g00549 391 PRINTS Disease resistance protein signature 248 262 - -
Pte11g00549 391 PRINTS Disease resistance protein signature 343 357 - -
Pte11g00549 391 Gene3D - 308 391 IPR042197 -
Pte11g00549 391 SMART AAA_5 172 376 IPR003593 GO:0016887
Pte11g00549 391 FunFam Probable disease resistance protein At1g61300 150 302 - -
Pte11g00549 391 Gene3D - 141 305 IPR027417 -
Pte11g00549 391 Pfam NB-ARC domain 163 379 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00549 Pte-Chr11 5628200 5629375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00549 173 293 WRKY Transcription Factor Family AT4G12020 30.952 6.72e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00549 - - qsa:O6P43_032611 458.373