Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00545 ATGCTCAATAACCGAAGCTTATTTGAAGATCAGCATGATCTGATACCCACGGAAATGGGTTTCTTTCCTTTCCTACAAAGCTTGAACTCGCCTGCGTTGGGATGCCACCAGGCTTCTCTTAAAGCCTTCGCAGCGATAAACCCATGTCTTGCATCAGATGCACATTCTGCTGCAGCTCCAACTCCGTGCAAAACCCTACTGGGATCTGCGACTCCCAATCCAAGGGACATCACTTGCAGTTTTGAAGGACAGCAACTCCTTGCTTTGCAAAGAAACCACTGGGCATGGGGAGATGTGAACGAGTGTTTAGGTAGCAAGAGAAGCACTGGAGGAGATGATCATTATCTAGGGGAGTCTGCAATGAAGATGAAGAAGATGAAGTCGAGGAGGAAAGTGAGGGAGCCAAGGTTTTGCTTCAAGACCATGAGTGATGTGGATGTGTTGGATGATGGCTACAAATGGAGGAAGTACGGACAAAAGGTGGTAAAGAACACACAGCACCCCAGGAGTTACTATCGTTGTACACGAGATAACTGTCGTGTGAAGAAACGGGTGGAGCGTTTAGCTGAAGATCCTAGGATGGTGATAACAACGTATGAAGGGAGACATGCACACTCTCCATCAAATGATCTTGAAGATTCGCAGACTCTTGATAATTTTTTGTTTTAG 669 0.4619 MLNNRSLFEDQHDLIPTEMGFFPFLQSLNSPALGCHQASLKAFAAINPCLASDAHSAAAPTPCKTLLGSATPNPRDITCSFEGQQLLALQRNHWAWGDVNECLGSKRSTGGDDHYLGESAMKMKKMKSRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTRDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQTLDNFLF* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00545 222 SUPERFAMILY WRKY DNA-binding domain 140 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g00545 222 FunFam WRKY transcription factor 57 134 208 - -
Pte11g00545 222 Gene3D WRKY domain 135 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g00545 222 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 114 208 IPR044810 GO:0003700
Pte11g00545 222 ProSiteProfiles WRKY domain profile. 143 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g00545 222 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g00545 222 Pfam WRKY DNA -binding domain 149 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00545 Pte-Chr11 5593335 5597289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00545 119 213 WRKY Transcription Factor Family AT4G39410 86.316 2.44e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte11g00545 WRKY 8.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00545 - - cave:132166144 291.582