Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00530 ATGTCGGCAACATCACCATCTCCCAATTCGTCTGTACCTGCTGTACCGCCAGCTTCTACCACCACGCCCCCTCCACAACCACAGTCAACGCCTCCCTCCTCTACCTCTAGTCCACCTCTACAACTACCACCACCCTCTGAGAGCCCCCCACCACAACCTTCTTCTTCGCCAAGCCGTCAGCCAAGTGCTAATCCTCCGGCAATTTCAACGCCATCAAATCCCACCCCACCACCACAGTCCCCACCTCCTGCAGTTAGTTCAAGTCCTCCACCTTCCACACTATCACCGCCTCCACCATCACGACCGCCATCCTCCCCGCCAGTAACAACTGTACCTCAGCCTTCTTCAGCACCTCCTCCCCCTTCTACACAGCAAACACCTCCACCTTCCAGTGCTCCACCACCGCGAACTCCTCCTCCTCCTGGCAGTACGCCACCACCAACTACTCCTGCTAATGCTCCACCCCCGTCATCTCCTGATCCTCCCCCTCCACCGCCAGTTCCACCTCAACGTTCACCTCCTCCACCACGAATAAACTCTTCTCTTCCGTCACCACCAGTAAATTCTCCACCTCCTCCATCACCACCAGTGAATTCTCCTTCTCCCCCCTCTCCACCACAATCTCCAGCATCTCCACCTACATCACCACCTAAAAGTATACCGCCACCTCCTACAGCTGTGCCACCACGAAGCCCGCCTTCACCTCCAGCATCAAGTCCTCAAAGGGCACCCGTGCGACCTGCTCCACCACCACCAAGAACAACGCCTAGTCCACCAGATCCATCCCCTCCAAATACTTCATCAGGAGTTTCCCCTCCAGGACGTCCTTCTGCCGGATCTCCACCAACTACCAATGGAACAGAAACTTCAAATTCCAACAGAGGTGGTGGCATTGGTACTGGTGGTGCAGTAGCCATTGCAGTGATAGTGGGTATGGTATTTCTGAGTCTGCTTGGTTGCTTTATCTGGTGCATGAAGAAAAAGAAAAAAAGGGCTTCTGAAAACGGTTATATCGTGCCATCAGCACTTGGTTCGTCACCTGGATCAGATTCGTCCTTTCTAAAGGGACATTCTTCTGCCCCTCTTATACCTAGTGCTTCTGGCAGCGATTTTGTGAGTTCACCATCAGAACCCGGTGGACTAGGGAACTCACGATCATGGTTCACATATGAAGAATTAATAAAGGCCACGAATGGCTTTTCGGAACAAAATCTTTTGGGTGAAGGTGGATTTGGATCAGTATACAGGGGTCGTCTACCTGATGGTAGAGAGATAGCTGTAAAACAACTGAAAATTGGTGGTGGTCAGGGTGAGCGAGAATTTAAAGCTGAAGTGGAGATTATAAGTCGCATACATCACCGTCATTTGGTATCTTTAGTGGGATACTGCATTTCTGACAACAGAAGGCTACTAGTTTATGACTATCTCCCTAACAATAACCTTTATTTCCATCTCCATGCGGAGGGTAAGCCTTTCTTGGACTGGGCAAAACGGGTTAAAGTTGCTGTTGGAGCTGCACGAGGAATAGCCTATCTCCATGAGGATTGCCAACCTCGAATTATACATAGGGATATCAAGTCACCTAACATTCTTTTAGACCACAACTTTGAAGCCCGAGTTTCAGATTTTGGGATGGCCAAATTAGCTCTTGACGCTGATACACATATTACCACACGTGTCATTGGAACTTTTGGTTATGTGGCCCCAGAATATGCATCAAGTGGTAAATTGACTGAGAAATCAGATGTCTATTCTTTCGGAGTTGTGCTTTTGGAGTTAATTACGGGAAGGAAGCCAGTTGATACATCCCAACCCATGGGAGATGAAAGTCTAGTTGAATGGGTGAATACACACTGA 1857 0.4954 MSATSPSPNSSVPAVPPASTTTPPPQPQSTPPSSTSSPPLQLPPPSESPPPQPSSSPSRQPSANPPAISTPSNPTPPPQSPPPAVSSSPPPSTLSPPPPSRPPSSPPVTTVPQPSSAPPPPSTQQTPPPSSAPPPRTPPPPGSTPPPTTPANAPPPSSPDPPPPPPVPPQRSPPPPRINSSLPSPPVNSPPPPSPPVNSPSPPSPPQSPASPPTSPPKSIPPPPTAVPPRSPPSPPASSPQRAPVRPAPPPPRTTPSPPDPSPPNTSSGVSPPGRPSAGSPPTTNGTETSNSNRGGGIGTGGAVAIAVIVGMVFLSLLGCFIWCMKKKKKRASENGYIVPSALGSSPGSDSSFLKGHSSAPLIPSASGSDFVSSPSEPGGLGNSRSWFTYEELIKATNGFSEQNLLGEGGFGSVYRGRLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDNRRLLVYDYLPNNNLYFHLHAEGKPFLDWAKRVKVAVGAARGIAYLHEDCQPRIIHRDIKSPNILLDHNFEARVSDFGMAKLALDADTHITTRVIGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPMGDESLVEWVNTH* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00530 618 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 310 616 IPR047117 -
Pte11g00530 618 Gene3D Transferase(Phosphotransferase) domain 1 476 618 - -
Pte11g00530 618 MobiDBLite consensus disorder prediction 10 60 - -
Pte11g00530 618 Pfam Protein tyrosine and serine/threonine kinase 403 603 IPR001245 GO:0004672|GO:0006468
Pte11g00530 618 MobiDBLite consensus disorder prediction 67 279 - -
Pte11g00530 618 ProSiteProfiles Protein kinase domain profile. 400 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00530 618 CDD STKc_IRAK 406 615 - -
Pte11g00530 618 SMART serkin_6 400 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00530 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Pte11g00530 618 FunFam Proline-rich receptor-like protein kinase PERK8 372 475 - -
Pte11g00530 618 FunFam proline-rich receptor-like protein kinase PERK8 476 618 - -
Pte11g00530 618 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Pte11g00530 618 MobiDBLite consensus disorder prediction 280 296 - -
Pte11g00530 618 SUPERFAMILY Protein kinase-like (PK-like) 381 607 IPR011009 -
Pte11g00530 618 Gene3D Phosphorylase Kinase; domain 1 378 475 - -
Pte11g00530 618 MobiDBLite consensus disorder prediction 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00530 Pte-Chr11 5199092 5205426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00530 291 614 Trihelix Transcription Factor Family AT1G68690 69.939 1.00e-173 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte11g00530 PK_Tyr_Ser-Thr 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00530 - - mnt:21409212 514.998