Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00528 ATGGACAAAGTTTCTAACAGAGTCATCAAAACTGAGCAAATAACCATGGTCGATGACGATGATGATAGTGGTCGAGCCAATTCTTGTGTTTCCTATGATTGTCTCATGGTTATTGACGCCGGCGGTGTCAAGAAAGAGGAACCACTGGTCCTAGACGATACAGTGGATGGAGTGATTGGGTCTTCATCTACATCTTCACCTGAGTTGCCTAAACCCATGGAAGGATTGCACGAGGTGGGTCCACCTCTGTTCCTAAAGAAGACGTTTGAAATGGTTGAGGACTCGAAAACTGACTTGATTGTCTCGTGGAGTGAGGGTCTGGACAATTTCGTAGTCTGGGATTCACACGAATTTTCTAAAATTCTTCTTCCCAGATATTTCTCCAGCTTCATTCGCCAGCTCAACACTTATGGATTTAAGAAGATTGATTCAGATCGTTGGGAGTTTGCAAATGAAGGATTTCGTGGAGGGAAGAAACATTTGTTGAAAAACATAAAATGGAGGAGCAAGTATGATAAGTTACAGCAAGGAGGGATGATGGGTTTAATGGAACCCGGACGTGAAGTTGAGATGGAGAGACTGAGGAAGGATCACAACATGTTGAATTTGGAAATCTTGAAGATGAGACAGAAGCAGGAGGAATCACAGACCAAAATGGCAAGAAACCCCAACTCAATTTAG 681 0.4302 MDKVSNRVIKTEQITMVDDDDDSGRANSCVSYDCLMVIDAGGVKKEEPLVLDDTVDGVIGSSSTSSPELPKPMEGLHEVGPPLFLKKTFEMVEDSKTDLIVSWSEGLDNFVVWDSHEFSKILLPRYFSSFIRQLNTYGFKKIDSDRWEFANEGFRGGKKHLLKNIKWRSKYDKLQQGGMMGLMEPGREVEMERLRKDHNMLNLEILKMRQKQEESQTKMARNPNSI* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00528 226 SMART hsfneu3 80 168 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g00528 226 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 70 219 IPR027725 -
Pte11g00528 226 Gene3D - 77 169 IPR036388 -
Pte11g00528 226 Pfam HSF-type DNA-binding 84 166 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte11g00528 226 FunFam Heat stress transcription factor B-4 76 169 - -
Pte11g00528 226 SUPERFAMILY "Winged helix" DNA-binding domain 81 166 IPR036390 -
Pte11g00528 226 Coils Coil 191 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00528 Pte-Chr11 5192201 5193056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00528 70 220 HSF AT2G26150 58.642 8.83e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte11g00528 HSF_DNA-bind 5.2e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00528 K09419 - qsa:O6P43_022426 238.424