Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00524 ATGAACTTGGATGGGGAGACAAATTTAAAACTAAAGCAAGGACTGGAGGTGACATCATTCTTACACGAGGAGTCCGACTTGGGTGATTTTAAAGCCCTTGTCAAATGTGAAGACCCTAATGCCAATTTGTACTCTTTTGTGGGAACAATGGAATTTGAAGAGCAACAATATCCCCTCTCACCTCAGCATCTGCTCCTTAGAGATTCCAAACTCAGAAACACGGACTACATATATGGAGCTGTAATCTTTAGTGGTCCTGACACTAAGGTTATTCAAAATTCTACTGATCCACCGTCAAAGAGAAGCAAGATTGAGAAGAAGATGGATAGAATAATCTATTTCTTATTCTGTATTCTGTTTCTAATGGCATTTGTCGGGTCTATTTTCTTTGGTATTGCTACTAAGGATGACTTGGGAAATGGGACCATGAAAAGGTGGTATTTAAGACCAGATGATTCTACTGTTTTCTTTGATCCTAAAAGAGCTACTGTAGCTGCAATTTGTCACTTTCTGACAGCCCTCATGTTGTATGGGTTCTTTATTCCAATCTCCTTGTATGTGTCCATAGAAATTGTGAAAGTCCTTCAGAGCATTTTCATTAATCAAGATATTCATATGTATTATGAGGAAGCTGATAAACCAGCTCATGCCCGTACATCAAACTTGAATGAGGAACTTGGTCAAGTTGATACAATACTTTCTGATAAGACAGGAACCCTTACCTGCAATTCCATGGAGTTCATTAAATGCTCCATTGGTGGGGTAGCTTATGGCCGTGGAGTTACAGAGGTTGAGAGGGCTATGGGCCAAAAGAAGGGTTCAAGCTTAGTTAATGCTCATGTCAATGGAACCGGAGAGTCAAAGCTACCAATCAAAGCCTTTAATTTTACAGACGAAAGAATAATGGCTGGAAATTGGGTTAACGAGCCTCATGCAGATGTGATTCAGAAGTTTTTGCATTTGTTAGCAATTTGTCATACAGCTATACCTGAAGTGGATGAAGTCACAGGAAAAGTCTCTTATGAGGCCGAGTCACCTGACGAAGCAGCATTTGTGATTGCAGCAAGAGAGCTTGGTTTTGAATTCTATCAAAGAACACAGACAAGTGTATCGTTGCATGAGTTAGATCCCATTTCTGGAGAGAAAGTTGAAAGGACCTATAGACTTCTCAATGTGTTAGAGTTCAATAGTGCAAGAAAGCGAATGTCTGTGATAATAAAAGACGAGGATGAAAAAGTAATGATACTCTGTAAAGGTGCTGACAGTGTGATGTTTGAAAGAATTGCTAAAACTGGAAGAGAATTTGAGGAGATGACTAGAAAACATGTAAATGAGTATGCTGATGCGGGTTTAAGAACTTTAATACTTGCCTATCGCGAGCTTTCGGTAGAGGAGTACAGAGAGTTTGAAGAGAAATTCTCTGCTGCAAGGAATTCTATTAGTGCAGATAGAGATCAACTGATAGATGAATTGTCCGACAAAGTTGAAAGGGACCTAATACTTCTAGGAGCAACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGACTGCATTGACAAGCTTGCCCAAGCAGGTATCAAAATATGGGTGCTGACTGGTGACAAAATGGAGACTGCCATCAACATCGGCTTCGCATGTAGTTTGCTCAGACAAGGGATGCGTCAAATCATCATCACTTTGGACAGCCCAGAAATTGAAGCTTTGGAAAATGAAGGGGCAAAATCTGCAATCTTCGAGGCATCAAATGAAAGTGTCAGCCGTCAGATCTCTGAAGGGATTGCTCATATTCAATCTAACGTCACTTCTGATCCATTTGCTCTAATCATTGATGGAAAGTCACTAACTTATGCGTTAGAGGATGAAATGAAAAATATGTTTCTGGAACTTGCGGTGCATTGTGCATCTGTTATTTGCTGTCGATCTTCACCAAAACAGAAGGCACTGGTTACAAGACTGGTAAAATCTGGAACTGGGAAGACAACGTTAGCAATTGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTAGGAATAAGCGGTGTGGAAGGAATGCAGGCTGTCATGTCCAGTGACATTGCAATCGCTCAGTTTCGGTACCTGGAGCGTCTTCTCCTTGTGCATGGACATTGGTGTTACCGAAGGATATCATCCATGATATGCTACTTTTTCTTCAAGAACATCACGTTTGGTTTCACTTTGTTCTTGTATGAGGTGTATGCCTCATTCTCTGGAACACCTGCATACAACGACTGGTTTCTATCACTTTATAATGTATTCTTCTCATCACTTCCTGTCATTGCCATGGGAGTATTTGACCAGGACGTATCTGCCAGATTCTGTCTAAAGGTATGCTCACCATCTGACATGCAGTACTTCAGAAAAGATTTGGGGTAA 2412 0.41 MNLDGETNLKLKQGLEVTSFLHEESDLGDFKALVKCEDPNANLYSFVGTMEFEEQQYPLSPQHLLLRDSKLRNTDYIYGAVIFSGPDTKVIQNSTDPPSKRSKIEKKMDRIIYFLFCILFLMAFVGSIFFGIATKDDLGNGTMKRWYLRPDDSTVFFDPKRATVAAICHFLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGRGVTEVERAMGQKKGSSLVNAHVNGTGESKLPIKAFNFTDERIMAGNWVNEPHADVIQKFLHLLAICHTAIPEVDEVTGKVSYEAESPDEAAFVIAARELGFEFYQRTQTSVSLHELDPISGEKVERTYRLLNVLEFNSARKRMSVIIKDEDEKVMILCKGADSVMFERIAKTGREFEEMTRKHVNEYADAGLRTLILAYRELSVEEYREFEEKFSAARNSISADRDQLIDELSDKVERDLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMRQIIITLDSPEIEALENEGAKSAIFEASNESVSRQISEGIAHIQSNVTSDPFALIIDGKSLTYALEDEMKNMFLELAVHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFFKNITFGFTLFLYEVYASFSGTPAYNDWFLSLYNVFFSSLPVIAMGVFDQDVSARFCLKVCSPSDMQYFRKDLG* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00524 803 Pfam Phospholipid-translocating P-type ATPase C-terminal 693 789 IPR032630 -
Pte11g00524 803 NCBIfam HAD-IC family P-type ATPase 635 748 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g00524 803 Pfam Cation transport ATPase (P-type) 336 428 - -
Pte11g00524 803 SFLD p-type atpase 215 716 IPR044492 -
Pte11g00524 803 SUPERFAMILY HAD-like 228 720 IPR036412 -
Pte11g00524 803 PRINTS P-type cation-transporting ATPase superfamily signature 233 247 - -
Pte11g00524 803 PRINTS P-type cation-transporting ATPase superfamily signature 552 562 - -
Pte11g00524 803 PRINTS P-type cation-transporting ATPase superfamily signature 665 684 - -
Pte11g00524 803 NCBIfam phospholipid-translocating P-type ATPase 1 789 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte11g00524 803 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 789 - -
Pte11g00524 803 FunFam Phospholipid-transporting ATPase 344 502 - -
Pte11g00524 803 ProSitePatterns E1-E2 ATPases phosphorylation site. 235 241 IPR018303 -
Pte11g00524 803 Gene3D - 503 705 IPR023214 -
Pte11g00524 803 FunFam Phospholipid-transporting ATPase 502 705 - -
Pte11g00524 803 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 240 504 IPR023299 GO:0000166
Pte11g00524 803 Gene3D - 347 502 IPR023299 GO:0000166
Pte11g00524 803 SFLD Haloacid Dehalogenase 215 716 - -
Pte11g00524 803 SUPERFAMILY Calcium ATPase, transmembrane domain M 95 785 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00524 Pte-Chr11 5178902 5182807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00524 1 789 Primary Pumps ATPases AT1G68710 76.692 0.0 1277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00524 K01530 - qsa:O6P43_025645 1325.46