Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00523 ATGGGGCGTGGCAGAAAGAAAATACGTCTGAGCAAGATCTATTCACTTACATGTGGTAAAGCATCAATTCAAGGTGACCATACCCAAATTGGGAGGAAAGGTTTTTCAAGAGTTGTTTACTGCAATGATCCAGGGTGCTTTGAAGCGGAAATTCTCAATTATCCTGAGAACTATATTAGTTCTACTAAATATACTCTTGCTACTTTCTTGCCAAAGTCTTTGTTTGAGCAATTTAGGAGAGTAGCCAATTTTTACTTTCTAGTCACTGGTACCTTGGCCTTCACCAAACTTGCTCCATATACAGCTGTCAGTGCCATTGTTCCTCTGATAATTGTCATTGGGGCAACCATGGTGAAAGAAGGTATTGAGGATTGGAGAAGGAAAAGGCAGGTAATATTTCAGATTTTCCCAGTTTCATCTCGATATATATATATATATATATATGTATGTATATGTATTCCCGTTTAA 468 0.3761 MGRGRKKIRLSKIYSLTCGKASIQGDHTQIGRKGFSRVVYCNDPGCFEAEILNYPENYISSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTKLAPYTAVSAIVPLIIVIGATMVKEGIEDWRRKRQVIFQIFPVSSRYIYIYIYVCICIPV* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00523 155 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 135 IPR023298 -
Pte11g00523 155 Pfam Phospholipid-translocating ATPase N-terminal 39 105 IPR032631 -
Pte11g00523 155 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00523 Pte-Chr11 5177840 5178307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00523 8 130 Primary Pumps ATPases AT1G68710 73.171 4.14e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00523 K01530 - cit:102613579 208.764