Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00517 ATGATGCCCCCTGAGCAAGAAACAGGATCCCTCAACACCATCACCATGACATCAAATATCCCAGTTACAAATCGATCTGACAACGGTTTAGTCCATGCTGAACCATCTTATTCTAGTAGTAGTAGTAGTGACAAAAACCTCAATTCAGATAATATCAATAGCATTCCCTATCAACAACAGCAAACCCCATCAAGATTCTCCATTCTCCATAAATCCATACGTCCTGTTTCCCTCAAGTTTATAGATGTCACATACAGCATATACTTGGGAACCACAAAGAATGGCTGTTTCTCAAATGAACCAAAGCTGACTAGAAACGTACTGAATGGTGTGACTGGAATTGTTCAGCCTGGTGAGCTTCTAGCAATGTTGGGTCCATCGGGCAGTGGCAAGACCACATTGCTTACTGCATTAGCTGGCCGTTCAACCGGAAAGTTTTCCGGCAGTATAACTTACAATGGACAGCCTTTCTCAAGCTCGATGAAACGAAAGACTGGTTTTGTCACCCAGGACGATGTGTTATACCCTCACCTCACAGTGCTTGAAACATTGACATATGCAGCCTTGTTAAGACTCCCAAAGGACCTTAGCAAAGAGGAGAAAATTGAGCAAGCTGAGTCAGTCGTTGTTGAGCTTGGACTAACTACATGCAGAAATAGTCCCATAGGCTGCGGTGGGGCTTTGTTTAGGGGTATATCCGGTGGTGAACGGAGGCGGGTCAGTATTGGGCAGGAAATGTTGGTTAACCCGAGTTTGTTACTGTTGGATGAACCCACGTCCGGCCTGGACTCAACGACAGCTGAGAAGATTGTCGCAATGTTGCGGGGCCTTGCAGGTGGTGGCCGGACGGTCATCACAACCATTCATCAACCTTCAAGCAGGTTGTATATGATGTTTGATAAGGTGATGGTTCTAGCAGACGGGTACCCGATTTATAGTGGGCAAGCAGGTCGGGTGATGGAGTATTTCGGTTTCATAGGTTTTATGCCCGGATGGAATTTTATCAACCCTGCTGATTTTCTACTTGACTTGGCCAACGGTACAGCTCCTGATGCTAAACAAGATGATCAACTTGAGTTGTATGCAAGAGAAGAGCACCATGAGAATCAAGTTTCAACAAAACAATTCCTTGTTTCTTGTTATAAAAAGAATTTATATCCTGCTCTAAGAGCTGAGATCAACAACAGTACTGAAAGAGAGCACGCTGCTTTCACATTAGAAGCATCTTTTTCTAGAAGTTCTGAAAATCAATGGACAACAACTTGGTGGAAGCAATTCAATGTGCTGCTCAAGAGAAGCTTACGAGAGAGAAGGCATGAATCTTATTCTGGTTTGAGGATTTTTCAAGTCATGTCTGTCTCATTTCTTTCCGGACTTCTCTGGTGGCATTCTGATGTTTCACATTTACAAGATCAGGTTAGCCTACTTTTTTTCTTCTCGATCTTCTGGGGTTTCTTCCCTTTCTTCAGTGCCATTTTCACATTCCCAACGGAGAAGGCGATGCTTATCAAGGAGCAATCTTCAAGCATGTATCATCTCTCATCCTACTACTTCGCCAGAATGGTGGGAGACTTGCCCATGGAGCTTGTACTCCCCACCATTTTTGTTACCATCACATACTGGATGGGAGGTCTCAAGCCAACACCATTTGCTTTCACGTCCACTCTCGTTATCATTTGGGTTAATGTGCTTGTCGCTCAAGGAATCGGCCTAGCTCTAGGTGCCATACTCATGGATCTAAAGAAGGCAACAACATTAGCTTCTGTCATCATGTTAGTATTTTTATTAGCTGGTGGATATTATATTCAGCATATGCCATTTTTCATAGTTTGGTTGAAGTACGTGTCTTTCAGTCACTACTGCTACAAACTTTTAGTAGGAGTGCAGTACTCAGTAGATGAAGTTTACGAGTGTGGAATAGGATTGCATTGTAGGGTAATGGATTTTCCTGCGATTGAAAATCTGGGGCTTGATAATATGTGGGAAGATGTTGCTGCATTGACTGTAATGTTGATAGGATACAGAGTTCTGGCATATGTAGCTCTGAGGATTGGACTACTTCGCTAG 2067 0.434 MMPPEQETGSLNTITMTSNIPVTNRSDNGLVHAEPSYSSSSSSDKNLNSDNINSIPYQQQQTPSRFSILHKSIRPVSLKFIDVTYSIYLGTTKNGCFSNEPKLTRNVLNGVTGIVQPGELLAMLGPSGSGKTTLLTALAGRSTGKFSGSITYNGQPFSSSMKRKTGFVTQDDVLYPHLTVLETLTYAALLRLPKDLSKEEKIEQAESVVVELGLTTCRNSPIGCGGALFRGISGGERRRVSIGQEMLVNPSLLLLDEPTSGLDSTTAEKIVAMLRGLAGGGRTVITTIHQPSSRLYMMFDKVMVLADGYPIYSGQAGRVMEYFGFIGFMPGWNFINPADFLLDLANGTAPDAKQDDQLELYAREEHHENQVSTKQFLVSCYKKNLYPALRAEINNSTEREHAAFTLEASFSRSSENQWTTTWWKQFNVLLKRSLRERRHESYSGLRIFQVMSVSFLSGLLWWHSDVSHLQDQVSLLFFFSIFWGFFPFFSAIFTFPTEKAMLIKEQSSSMYHLSSYYFARMVGDLPMELVLPTIFVTITYWMGGLKPTPFAFTSTLVIIWVNVLVAQGIGLALGAILMDLKKATTLASVIMLVFLLAGGYYIQHMPFFIVWLKYVSFSHYCYKLLVGVQYSVDEVYECGIGLHCRVMDFPAIENLGLDNMWEDVAALTVMLIGYRVLAYVALRIGLLR* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00517 688 Gene3D - 92 324 IPR027417 -
Pte11g00517 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 332 IPR003439 GO:0005524
Pte11g00517 688 Pfam ABC-2 type transporter 289 350 IPR043926 GO:0140359
Pte11g00517 688 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524|GO:0016887
Pte11g00517 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 679 - -
Pte11g00517 688 FunFam ABC transporter G family member 22 96 326 - -
Pte11g00517 688 Pfam ABC-2 type transporter 425 630 IPR013525 GO:0016020|GO:0140359
Pte11g00517 688 Pfam ABC transporter 108 260 IPR003439 GO:0005524
Pte11g00517 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 329 IPR027417 -
Pte11g00517 688 MobiDBLite consensus disorder prediction 1 60 - -
Pte11g00517 688 SMART AAA_5 117 310 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00517 Pte-Chr11 5098425 5102443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00517 93 308 Calmodulin-binding Proteins AT2G36910 30.531 6.92e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00517 K05681 - qsa:O6P43_032812 987.638